RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 GTPBP3Q969Y2 492 aaKnown RBP19.79■□□□□ 0.76
RNF40-203ENST00000493683 KLRG1Q96E93 195 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 ADAM17P78536 824 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 PLA2G4EQ3MJ16 856 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 RNASE12Q5GAN4 147 aaKnown RBP19.79■□□□□ 0.76
RNF40-203ENST00000493683 MCEMP1Q8IX19 187 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 PCDH19Q8TAB3 1148 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 CCDC107Q8WV48 283 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 ZIM2Q9NZV7 527 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 KLF11O14901 512 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 CNPY1Q3B7I2 92 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 HSDL1Q3SXM5 330 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 TMEM214Q6NUQ4 689 aaKnown RBP19.79■□□□□ 0.76
RNF40-203ENST00000493683 CFAP206Q8IYR0 622 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 TMEM209Q96SK2 561 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 C11orf16Q9NQ32 467 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 SALL4Q9UJQ4 1053 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 PMF1-BGLAPU3KQ54 211 aa19.79■□□□□ 0.76
RNF40-203ENST00000493683 ACSL1P33121 698 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 ZBED5Q49AG3 693 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 CHADLQ6NUI6 762 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 SIDT2Q8NBJ9 832 aaKnown RBP19.78■□□□□ 0.76
RNF40-203ENST00000493683 FUBP3Q96I24 572 aaKnown RBP eCLIP19.78■□□□□ 0.76
RNF40-203ENST00000493683 CNDP2Q96KP4 475 aaKnown RBP19.78■□□□□ 0.76
RNF40-203ENST00000493683 LGR4Q9BXB1 951 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 GTF2IRD1Q9UHL9 959 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 OR1F1O43749 312 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 CYP11A1P05108 521 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 DNAJA1P31689 397 aaKnown RBP19.78■□□□□ 0.76
RNF40-203ENST00000493683 ILF3Q12906 894 aaKnown RBP eCLIP19.78■□□□□ 0.76
RNF40-203ENST00000493683 TCEAL6Q6IPX3 200 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 REM2Q8IYK8 340 aaPredicted RBP19.78■□□□□ 0.76
RNF40-203ENST00000493683 KLHL36Q8N4N3 616 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 RBM18Q96H35 190 aaKnown RBP19.78■□□□□ 0.76
RNF40-203ENST00000493683 TLL1O43897 1013 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 FAM163BP0C2L3 166 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 SLC1A2P43004 574 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 GOLGA2P5Q9HBQ8 144 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 DTLQ9NZJ0 730 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 KMOO15229 486 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 NCK1P16333 377 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 CBLBQ13191 982 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 TUBA3CQ13748 450 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 ATAD1Q8NBU5 361 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 PCED1BQ96HM7 432 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 ZSWIM3Q96MP5 696 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 NTPCRQ9BSD7 190 aaKnown RBP19.78■□□□□ 0.76
RNF40-203ENST00000493683 FKBPLQ9UIM3 349 aa19.78■□□□□ 0.76
RNF40-203ENST00000493683 RLN2P04090 185 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 ALPPP05187 535 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 HCAR3P49019 387 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 SLC9B1Q4ZJI4 515 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 LDB1Q86U70 411 aaPredicted RBP19.77■□□□□ 0.76
RNF40-203ENST00000493683 PIGKQ92643 395 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 PIWIL1Q96J94 861 aaKnown RBP19.77■□□□□ 0.76
RNF40-203ENST00000493683 C1orf21Q9H246 121 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 GRIN2DO15399 1336 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 CYB5AP00167 134 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 RBM34P42696 430 aaKnown RBP19.77■□□□□ 0.76
RNF40-203ENST00000493683 RASGEF1BQ0VAM2 473 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 FAM189A2Q15884 450 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 TIGD6Q17RP2 521 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 CYP2U1Q7Z449 544 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 SEZ6LQ9BYH1 1024 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 POLR2J3Q9H1A7 115 aaKnown RBP19.77■□□□□ 0.76
RNF40-203ENST00000493683 C12orf65Q9H3J6 166 aaKnown RBP19.77■□□□□ 0.76
RNF40-203ENST00000493683 STOX2Q9P2F5 926 aaPredicted RBP19.77■□□□□ 0.76
RNF40-203ENST00000493683 WASF2Q9Y6W5 498 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 SNX4O95219 450 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 ZNF823P16415 610 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 NDUFV1P49821 464 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 ACSBG2Q5FVE4 666 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 ERLEC1Q96DZ1 483 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 ART5Q96L15 291 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 TUBGCP5Q96RT8 1024 aa19.77■□□□□ 0.76
RNF40-203ENST00000493683 STBD1O95210 358 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 AZGP1P25311 298 aaKnown RBP19.77■□□□□ 0.75
RNF40-203ENST00000493683 DDX6P26196 483 aaKnown RBP eCLIP19.77■□□□□ 0.75
RNF40-203ENST00000493683 GJA8P48165 433 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 PSMD8P48556 350 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 TUBA1BP68363 451 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 HSPB3Q12988 150 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 LBX2Q6XYB7 198 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 MBOAT1Q6ZNC8 495 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 TUBA1AQ71U36 451 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 GALNT7Q86SF2 657 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 IQCF2Q8IXL9 164 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 SLC35B2Q8TB61 432 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 C12orf66Q96MD2 445 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 RMI1Q9H9A7 625 aa19.77■□□□□ 0.75
RNF40-203ENST00000493683 DAPL1A0PJW8 107 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 AKAP8O43823 692 aaKnown RBP19.76■□□□□ 0.75
RNF40-203ENST00000493683 B3GALT2O43825 422 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 LILRA4P59901 499 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 TUBA3EQ6PEY2 450 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 ZMIZ2Q8NF64 920 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 CCDC115Q96NT0 180 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 TBC1D17Q9HA65 648 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 ZDHHC18Q9NUE0 388 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 POFUT2Q9Y2G5 429 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms