RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LRRN3Q9H3W5 708 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 COL6A6A6NMZ7 2263 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 BOD1L1Q8NFC6 3051 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 PRAMEF33A0A0G2JMD5 474 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 TCRBV9S1A1TA0A576 114 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 SLC5A10A0PJK1 596 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 LILRA5A6NI73 299 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 D6RAR5 112 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 KPNA5O15131 536 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 CASC3O15234 703 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 DUX1O43812 170 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 VPS26AO75436 327 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 SPAG6O75602 509 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 HAUS5O94927 633 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 SLU7O95391 586 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 AOAHP28039 575 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 RBMS1P29558 406 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 STX2P32856 288 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 GPR3P46089 330 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 GPX6P59796 221 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 PLOD1Q02809 727 aaPredicted RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 VAC14Q08AM6 782 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 GPR18Q14330 331 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 NR1D2Q14995 579 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 ISXQ2M1V0 245 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 C3orf38Q5JPI3 329 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 RBM20Q5T481 1227 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 ZNF549Q6P9A3 640 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 RBM44Q6ZP01 1051 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 GSPT2Q8IYD1 628 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 SLC22A15Q8IZD6 547 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 ZBTB2Q8N680 514 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 GPATCH11Q8N954 259 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 OR10G6Q8NH81 332 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 WDR48Q8TAF3 677 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 SKA2Q8WVK7 121 aaPredicted RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 JPH3Q8WXH2 748 aaPredicted RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 AHCYL2Q96HN2 611 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 AARSD1Q9BTE6 412 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 HGH1Q9BTY7 390 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 TBC1D10AQ9BXI6 508 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 CDC42EP4Q9H3Q1 356 aaKnown RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 ASCL3Q9NQ33 180 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 NSMCE4AQ9NXX6 385 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 MOCS1Q9NZB8 636 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 NINJ2Q9NZG7 142 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 ATXN7L1Q9ULK2 861 aaPredicted RBP11.3□□□□□ -0.6
CTSA-209ENST00000493522 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 HEBP2Q9Y5Z4 205 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 COMMD10Q9Y6G5 202 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 PCM1Q15154 2024 aa11.3□□□□□ -0.6
CTSA-209ENST00000493522 BSNQ9UPA5 3926 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 IGHV1OR21-1A0A087WYE8 117 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 A0A1W2PQM1 296 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 PIAS1O75925 651 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 PHBP35232 272 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 EPHA4P54764 986 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 KYNUQ16719 465 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 TTLL9Q3SXZ7 439 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 PLEKHS1Q5SXH7 462 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 NKAIN2Q5VXU1 208 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 CAPRIN2Q6IMN6 1127 aaKnown RBP11.29□□□□□ -0.6
CTSA-209ENST00000493522 C3orf62Q6ZUJ4 267 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 STRA8Q7Z7C7 330 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 GALNT7Q86SF2 657 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 SLC26A11Q86WA9 606 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 VRK3Q8IV63 474 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 CTAGE3PQ8IX95 158 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 RBM12BQ8IXT5 1001 aaKnown RBP11.29□□□□□ -0.6
CTSA-209ENST00000493522 SIDT2Q8NBJ9 832 aaKnown RBP11.29□□□□□ -0.6
CTSA-209ENST00000493522 CFAP61Q8NHU2 1237 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 SNRNP27Q8WVK2 155 aaKnown RBP11.29□□□□□ -0.6
CTSA-209ENST00000493522 KCNJ9Q92806 393 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 FERD3LQ96RJ6 166 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 GPR21Q99679 349 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 SLC40A1Q9NP59 571 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 SMYD2Q9NRG4 433 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 TXNDC16Q9P2K2 825 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 TRMT6Q9UJA5 497 aaKnown RBP11.29□□□□□ -0.6
CTSA-209ENST00000493522 ASF1AQ9Y294 204 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 PSAT1Q9Y617 370 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 COLEC10Q9Y6Z7 277 aa11.29□□□□□ -0.6
CTSA-209ENST00000493522 MYO18BQ8IUG5 2567 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 PIEZO2Q9H5I5 2752 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 FAM159BA6NKW6 160 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 CXorf49A8MYA2 514 aaPredicted RBP11.28□□□□□ -0.6
CTSA-209ENST00000493522 B8ZZF3 427 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 B4GAT1O43505 415 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 GPC4O75487 556 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 TCEA3O75764 348 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 ACSL3O95573 720 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 CPNE6O95741 557 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 AHSGP02765 367 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 TYRP1P17643 537 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 NDUFS1P28331 727 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 GABRB3P28472 473 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms