RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ATF7IP2Q5U623 682 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ANGEL2Q5VTE6 544 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C1orf146Q5VVC0 180 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PLCXD3Q63HM9 321 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 E4F1Q66K89 784 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SLFN12LQ6IEE8 588 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MRNIPQ6NTE8 343 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RFWD3Q6PCD5 774 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C4orf22Q6V702 233 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WASH2PQ6VEQ5 465 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SV2AQ7L0J3 742 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PARS2Q7L3T8 475 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TMC8Q8IU68 726 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MCATQ8IVS2 390 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZZZ3Q8IYH5 903 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ADGRF4Q8IZF3 695 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM58AQ8N1B3 248 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SVOPQ8N4V2 548 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FADS6Q8N9I5 356 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C8orf58Q8NAV2 365 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM116Q8NCL8 245 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C19orf18Q8NEA5 215 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 OR9K2Q8NGE7 335 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 OR13F1Q8NGS4 319 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NCOA7Q8NI08 942 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SUN3Q8TAQ9 357 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RHPN1Q8TCX5 695 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KBTBD7Q8WVZ9 684 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NELFBQ8WX92 580 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 COPS5Q92905 334 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ADIPOR1Q96A54 375 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM89AQ96GI7 184 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TEFMQ96QE5 360 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TAAR1Q96RJ0 339 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RANBP9Q96S59 729 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NDNQ99608 321 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 UBAC1Q9BSL1 405 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ANKRD60Q9BZ19 345 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 GPR88Q9GZN0 384 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TOLLIPQ9H0E2 274 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 S1PR5Q9H228 398 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CHST8Q9H2A9 424 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CCNB1IP1Q9NPC3 277 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PARVAQ9NVD7 372 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PARPBPQ9NWS1 579 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CMTM6Q9NX76 183 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KCNK4Q9NYG8 393 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 AHSPQ9NZD4 102 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SPG21Q9NZD8 308 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ONECUT1Q9UBC0 465 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SIX4Q9UIU6 781 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MAN1B1Q9UKM7 699 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SNX7Q9UNH6 387 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PSMD13Q9UNM6 376 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 VWA7Q9Y334 891 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RBMX2Q9Y388 322 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KLF2Q9Y5W3 355 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ASTN2O75129 1339 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PCDH11XQ9BZA7 1347 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PCDH11YQ9BZA8 1340 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NPATQ14207 1427 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF98A6NK75 572 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MARCH11A6NNE9 402 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PDZK1P1A8MUH7 402 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 A8MXQ7 604 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 E5RI56 91 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NPIPA2E9PIF3 369 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 H3BQ06 376 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF561-AS1K7EIQ3 104 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TLR4O00206 839 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CLDN4O14493 209 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ABCD4O14678 606 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TOX3O15405 576 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PSMD3O43242 534 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 DYRK3O43781 588 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 BNIP3LO60238 219 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NOS1APO75052 506 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 SERPINB7O75635 380 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 SEC14L2O76054 403 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 UNC5CO95185 931 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MBD3O95983 291 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PTPRCP08575 1304 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 HBQ1P09105 142 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 OR2T7P0C7T2 308 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 STAG3L1P0CL83 205 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CCNB1P14635 433 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 HK1P19367 917 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 UGT1A1P22309 533 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 DGKAP23743 735 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CD40P25942 277 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 AKT2P31751 481 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CXCR5P32302 372 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CYP2C18P33260 490 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CD80P33681 288 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PXNP49023 591 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TOB1P50616 345 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 RIDAP52758 137 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 KCNQ4P56696 695 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NUP107P57740 925 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms