RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CCL11P51671 97 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF140P52738 457 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 IL10RAQ13651 578 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 BOP1Q14137 746 aaKnown RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF658BQ4V348 819 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ANKRD20A2Q5SQ80 823 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ANKRD20A1Q5TYW2 823 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ANKRD20A3Q5VUR7 823 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 CERS6Q6ZMG9 384 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 DET1Q7L5Y6 550 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 AMIGO1Q86WK6 493 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 RAB43Q86YS6 212 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 CCDC50Q8IVM0 306 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ENDOVQ8N8Q3 282 aaKnown RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 PNPLA2Q96AD5 504 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 CLIP3Q96DZ5 547 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 TCTN2Q96GX1 697 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 SPATA13Q96N96 652 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 TRAPPC9Q96Q05 1148 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 FERD3LQ96RJ6 166 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 SMAD5Q99717 465 aaKnown RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 GORASP1Q9BQQ3 440 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 FICDQ9BVA6 458 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 SLC29A3Q9BZD2 475 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 OR52A5Q9H2C5 316 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 COG4Q9H9E3 785 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ACTR5Q9H9F9 607 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 PCMTD2Q9NV79 361 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 POLG2Q9UHN1 485 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 FKBPLQ9UIM3 349 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 HYOU1Q9Y4L1 999 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 PCDHA3Q9Y5H8 950 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 CFAP20Q9Y6A4 193 aaKnown RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 USP9YO00507 2555 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 BTNL10A8MVZ5 291 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 TMEM150CB9EJG8 249 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 C9J4A7 227 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 E7EQ34 232 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 F8W8V4 182 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 LIN7AO14910 233 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-212ENST00000492407 GPR39O43194 453 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 PSMD3O43242 534 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 DNAJB5O75953 348 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 TJP3O95049 919 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 AGFG2O95081 481 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 POLBP06746 335 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 CAPN1P07384 714 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 RBP3P10745 1247 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 CYP2A7P20853 494 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 ACRV1P26436 265 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 PBLDP30039 288 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-212ENST00000492407 PTGIRP43119 386 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 ITGA1P56199 1179 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 SOX8P57073 446 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 RPS18P62269 152 aaKnown RBP8.85□□□□□ -0.99
HDAC3-212ENST00000492407 SSPNQ14714 243 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 NCF4Q15080 339 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 SPA17Q15506 151 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 INPP5JQ15735 1006 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-212ENST00000492407 PARP6Q2NL67 630 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 C4orf17Q53FE4 359 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF789Q5FWF6 425 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 FAM182AQ5T1J6 154 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 DENND5AQ6IQ26 1287 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 JMJD6Q6NYC1 403 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-212ENST00000492407 IGFL3Q6UXB1 125 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF771Q7L3S4 317 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-212ENST00000492407 DAAM2Q86T65 1068 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 TMTC1Q8IUR5 882 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 SYTL1Q8IYJ3 562 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 GPR135Q8IZ08 494 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 TTC13Q8NBP0 860 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 OR1L3Q8NH93 324 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 ACTL9Q8TC94 416 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 PROKR1Q8TCW9 393 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 DENND1AQ8TEH3 1009 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 FER1L6-AS2Q96M78 137 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 RUFY1Q96T51 708 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 OSBPL8Q9BZF1 889 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 OR6C2Q9NZP2 312 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 PCDHA13Q9Y5I0 950 aa8.85□□□□□ -0.99
HDAC3-212ENST00000492407 GSAPA4D1B5 854 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 BLACEA4D250 179 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 BTN3A3O00478 584 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 BTN3A1O00481 513 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 PJA2O43164 708 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 LDB2O43679 373 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 IPO13O94829 963 aaKnown RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ST6GAL1P15907 406 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 GNLYP22749 145 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 CTNNA2P26232 953 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 SHMT2P34897 504 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 CYLC1P35663 651 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 NSG1P42857 185 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 RWDD2BP57060 319 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 EIF3EP60228 445 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms