RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RPE65Q16518 533 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 CSRP2Q16527 193 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 C6orf132Q5T0Z8 1188 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 IYDQ6PHW0 289 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 SBSNQ6UWP8 590 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 CDHR3Q6ZTQ4 885 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 UBE2R2Q712K3 238 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-230ENST00000491028 DCUN1D3Q8IWE4 304 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 TBC1D21Q8IYX1 336 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 SLC25A45Q8N413 288 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 OR5K2Q8NHB8 316 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 PTERQ96BW5 349 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 SCYL1Q96KG9 808 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 MRPL57Q9BQC6 102 aaKnown RBP18.17■□□□□ 0.5
MCF2L-230ENST00000491028 DUSP23Q9BVJ7 150 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 SLC12A9Q9BXP2 914 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 TRIM54Q9BYV2 358 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 UNKQ9C0B0 810 aaKnown RBP18.17■□□□□ 0.5
MCF2L-230ENST00000491028 MRPL46Q9H2W6 279 aaKnown RBP18.17■□□□□ 0.5
MCF2L-230ENST00000491028 ALG9Q9H6U8 611 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 MVB12BQ9H7P6 319 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 RDH14Q9HBH5 336 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 SEMA4GQ9NTN9 838 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 POT1Q9NUX5 634 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 IMP3Q9NV31 184 aaKnown RBP18.17■□□□□ 0.5
MCF2L-230ENST00000491028 NLGN3Q9NZ94 848 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 TMEM216Q9P0N5 145 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 SCHIP1Q9P0W5 487 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-230ENST00000491028 IKZF3Q9UKT9 509 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 OARD1Q9Y530 152 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 PCDHGB2Q9Y5G2 931 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 PABPN1LA6NDY0 278 aaKnown RBP18.16■□□□□ 0.5
MCF2L-230ENST00000491028 SYCE1LA8MT33 242 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 B4DGG1 531 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 TM9SF1O15321 606 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 KERAO60938 352 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 C1orf105O95561 183 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 MAP4P27816 1152 aaKnown RBP18.16■□□□□ 0.5
MCF2L-230ENST00000491028 SLC18A1P54219 525 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 SPEM2Q0P670 501 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 PPP1R3AQ16821 1122 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 DEFB133Q30KQ1 61 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 N4BP2L1Q5TBK1 243 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-230ENST00000491028 TTC23LQ6PF05 361 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 OGFOD3Q6PK18 319 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 FRA10AC1Q70Z53 315 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 SLC9B2Q86UD5 537 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 NAGSQ8N159 534 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 SFRP1Q8N474 314 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 CFAP61Q8NHU2 1237 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 MAPK15Q8TD08 544 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 CXorf40BQ96DE9 158 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 ATOH8Q96SQ7 321 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 TRIT1Q9H3H1 467 aaKnown RBP18.16■□□□□ 0.5
MCF2L-230ENST00000491028 PARVBQ9HBI1 364 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 DNAAF2Q9NVR5 837 aaKnown RBP18.16■□□□□ 0.5
MCF2L-230ENST00000491028 XPR1Q9UBH6 696 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 POLG2Q9UHN1 485 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 MID2Q9UJV3 735 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 ADAMTS6Q9UKP5 1117 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 RNF112Q9ULX5 631 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 PLLPQ9Y342 182 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 COLEC10Q9Y6Z7 277 aa18.16■□□□□ 0.5
MCF2L-230ENST00000491028 ARHGEF17Q96PE2 2063 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 OR52A4PA6NMU1 304 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 ARHGEF33A8MVX0 844 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 KDM1AO60341 852 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 PLIN3O60664 434 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 ZWINTO95229 277 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 GIMD1P0DJR0 217 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 XRCC1P18887 633 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 AP1S2P56377 157 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 CDKL1Q00532 357 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 SF3A2Q15428 464 aaKnown RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 OR4D1Q15615 310 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 C17orf82Q86X59 251 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 TRIM48Q8IWZ4 208 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 RBM12BQ8IXT5 1001 aaKnown RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 OR2I1PQ8NGU4 316 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 OR4C6Q8NH72 309 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 RDH11Q8TC12 318 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 MCOLN3Q8TDD5 553 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 TCP10LQ8TDR4 215 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 ZFPM2Q8WW38 1151 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 FERD3LQ96RJ6 166 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 STN1Q9H668 368 aaKnown RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 KCNK9Q9NPC2 374 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 ZNF624Q9P2J8 865 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 EMCNQ9ULC0 261 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 PDE10AQ9Y233 779 aa18.15■□□□□ 0.5
MCF2L-230ENST00000491028 CFAP20Q9Y6A4 193 aaKnown RBP18.15■□□□□ 0.5
MCF2L-230ENST00000491028 FFAR2O15552 330 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 NOBOXO60393 691 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 PROCP04070 461 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 HIST1H2AGP0C0S8 130 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-230ENST00000491028 HIST1H2ADP20671 130 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 SLC19A1P41440 591 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 BDKRB1P46663 353 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 RPIAP49247 311 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 UBE2IP63279 158 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms