RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	RBMS1	P29558	406 aa	Known RBP	18.06	■□□□□ 0.48
C4A-256	ENST00000490663	CD151	P48509	253 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	TBC1D25	Q3MII6	688 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	RBM20	Q5T481	1227 aa	Known RBP	18.06	■□□□□ 0.48
C4A-256	ENST00000490663	OTOA	Q7RTW8	1153 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	SIDT2	Q8NBJ9	832 aa	Known RBP	18.06	■□□□□ 0.48
C4A-256	ENST00000490663	BBOF1	Q8ND07	529 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	LRRN4CL	Q8ND94	238 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	ACVR1C	Q8NER5	493 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	SKA2	Q8WVK7	121 aa	Predicted RBP	18.06	■□□□□ 0.48
C4A-256	ENST00000490663	ASZ1	Q8WWH4	475 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	LCN9	Q8WX39	176 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	ART4	Q93070	314 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	C9orf72	Q96LT7	481 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	EPB41L1	Q9H4G0	881 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	ICK	Q9UPZ9	632 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	MED16	Q9Y2X0	877 aa		18.06	■□□□□ 0.48
C4A-256	ENST00000490663	PTPRQ	Q9UMZ3	2332 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	OR5K3	A6NET4	321 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663		E5RI56	91 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663		F8W8V4	182 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	TMX2-CTNND1	H3BSU7	103 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	BTN3A3	O00478	584 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	BTN3A1	O00481	513 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	PFDN6	O15212	129 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	ESR1	P03372	595 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	NDUFS1	P28331	727 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	CSTF2	P33240	577 aa	Known RBP eCLIP	18.05	■□□□□ 0.48
C4A-256	ENST00000490663	GUCY2D	Q02846	1103 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	CLPP	Q16740	277 aa	Predicted RBP	18.05	■□□□□ 0.48
C4A-256	ENST00000490663	CCSMST1	Q4G0I0	132 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	ACSBG2	Q5FVE4	666 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	CACHD1	Q5VU97	1274 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	ARHGAP22	Q7Z5H3	698 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	PLXDC1	Q8IUK5	500 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	ZBTB2	Q8N680	514 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	C2CD4A	Q8NCU7	369 aa	Predicted RBP	18.05	■□□□□ 0.48
C4A-256	ENST00000490663	CALML6	Q8TD86	181 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	USP7	Q93009	1102 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	GRAMD1A	Q96CP6	724 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	SLC46A1	Q96NT5	459 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	MAP3K3	Q99759	626 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	CMKLR1	Q99788	373 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	CTRC	Q99895	268 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	DPYSL5	Q9BPU6	564 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	NAT9	Q9BTE0	207 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	TRIT1	Q9H3H1	467 aa	Known RBP	18.05	■□□□□ 0.48
C4A-256	ENST00000490663	SRMS	Q9H3Y6	488 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	MVB12B	Q9H7P6	319 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	APMAP	Q9HDC9	416 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	WDR70	Q9NW82	654 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	HRASLS2	Q9NWW9	162 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	FOXJ2	Q9P0K8	574 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	PDP2	Q9P2J9	529 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	DMGDH	Q9UI17	866 aa	Known RBP	18.05	■□□□□ 0.48
C4A-256	ENST00000490663	PCDHGA8	Q9Y5G5	932 aa		18.05	■□□□□ 0.48
C4A-256	ENST00000490663	IGHV5-51	A0A0C4DH38	117 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	GSAP	A4D1B5	854 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	CTAGE15	A4D2H0	777 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	SRRM3	A6NNA2	597 aa	Predicted RBP	18.04	■□□□□ 0.48
C4A-256	ENST00000490663	PRAMEF10	O60809	474 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	SLCO2B1	O94956	709 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	CTAGE8	P0CG41	777 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	SSTR1	P30872	391 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	SLC5A2	P31639	672 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	KPNA2	P52292	529 aa	Known RBP	18.04	■□□□□ 0.48
C4A-256	ENST00000490663	SH3BP2	P78314	561 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	TRA2A	Q13595	282 aa	Known RBP eCLIP	18.04	■□□□□ 0.48
C4A-256	ENST00000490663	TEDDM1	Q5T9Z0	273 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	CTAGE6	Q86UF2	777 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	TAX1BP1	Q86VP1	789 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	OOSP2	Q86WS3	158 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	CTAGE4	Q8IX94	777 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	MMGT1	Q8N4V1	131 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	C2orf73	Q8N5S3	287 aa	Predicted RBP	18.04	■□□□□ 0.48
C4A-256	ENST00000490663	AGBL5	Q8NDL9	886 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	LRRC39	Q96DD0	335 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	IL17F	Q96PD4	163 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	GPR21	Q99679	349 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	AARSD1	Q9BTE6	412 aa	Known RBP	18.04	■□□□□ 0.48
C4A-256	ENST00000490663	KLHL25	Q9H0H3	589 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	CCDC68	Q9H2F9	335 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	SMYD2	Q9NRG4	433 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	DKK4	Q9UBT3	224 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	PSAT1	Q9Y617	370 aa		18.04	■□□□□ 0.48
C4A-256	ENST00000490663	CDRT15L2	A8MXV6	281 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	C9orf172	C9J069	976 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	HGS	O14964	777 aa	Predicted RBP	18.03	■□□□□ 0.48
C4A-256	ENST00000490663	CLCN7	P51798	805 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	EIF3I	Q13347	325 aa	Known RBP	18.03	■□□□□ 0.48
C4A-256	ENST00000490663	KCNAB1	Q14722	419 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.03	■□□□□ 0.48
C4A-256	ENST00000490663	PLEKHS1	Q5SXH7	462 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	UBAP2	Q5T6F2	1119 aa	Known RBP	18.03	■□□□□ 0.48
C4A-256	ENST00000490663	TRIM73	Q86UV7	250 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	OR5K2	Q8NHB8	316 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	GSDMB	Q8TAX9	411 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	AKAP7	Q9P0M2	348 aa	Predicted RBP	18.03	■□□□□ 0.48
C4A-256	ENST00000490663	VPS9D1	Q9Y2B5	631 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663	ITPR1	Q14643	2758 aa		18.03	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms