RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 TFGQ92734 400 aaPredicted RBP17.23■□□□□ 0.35
YIPF3-208ENST00000490447 SGSM3Q96HU1 749 aa17.23■□□□□ 0.35
YIPF3-208ENST00000490447 DNAJC1Q96KC8 554 aaKnown RBP17.23■□□□□ 0.35
YIPF3-208ENST00000490447 CALR3Q96L12 384 aaKnown RBP17.23■□□□□ 0.35
YIPF3-208ENST00000490447 TRAPPC9Q96Q05 1148 aa17.23■□□□□ 0.35
YIPF3-208ENST00000490447 ALS2CR12Q96Q35 445 aa17.23■□□□□ 0.35
YIPF3-208ENST00000490447 C17orf62Q9BQA9 187 aa17.23■□□□□ 0.35
YIPF3-208ENST00000490447 SLC29A3Q9BZD2 475 aa17.23■□□□□ 0.35
YIPF3-208ENST00000490447 ACTR10Q9NZ32 417 aa17.23■□□□□ 0.35
YIPF3-208ENST00000490447 PCDHA3Q9Y5H8 950 aa17.23■□□□□ 0.35
YIPF3-208ENST00000490447 USP9XQ93008 2570 aaPredicted RBP17.23■□□□□ 0.35
YIPF3-208ENST00000490447 UTP20O75691 2785 aaKnown RBP17.23■□□□□ 0.35
YIPF3-208ENST00000490447 IGLV3-16A0A075B6K0 115 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 ZNF749O43361 778 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 LDB2O43679 373 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 TJP3O95049 919 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 IPO7O95373 1038 aaKnown RBP17.22■□□□□ 0.35
YIPF3-208ENST00000490447 VARSP26640 1264 aaKnown RBP17.22■□□□□ 0.35
YIPF3-208ENST00000490447 PDHA2P29803 388 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 PTPN7P35236 360 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 RWDD2BP57060 319 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 MSLNQ13421 630 aaPredicted RBP17.22■□□□□ 0.35
YIPF3-208ENST00000490447 JMJD6Q6NYC1 403 aaPredicted RBP17.22■□□□□ 0.35
YIPF3-208ENST00000490447 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 CDHR3Q6ZTQ4 885 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.22■□□□□ 0.35
YIPF3-208ENST00000490447 DHRS4Q9BTZ2 278 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 NUDT9Q9BW91 350 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 MFRPQ9BY79 579 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 XKR8Q9H6D3 395 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 ARNT2Q9HBZ2 717 aa17.22■□□□□ 0.35
YIPF3-208ENST00000490447 GPN3Q9UHW5 284 aaPredicted RBP17.22■□□□□ 0.35
YIPF3-208ENST00000490447 H7C0S8 307 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 QSOX1O00391 747 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 CAPN1P07384 714 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 PVRP15151 417 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 CDKN1CP49918 316 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-208ENST00000490447 ATP1A4Q13733 1029 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
YIPF3-208ENST00000490447 INPP5JQ15735 1006 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-208ENST00000490447 KYNUQ16719 465 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 DENND5AQ6IQ26 1287 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 SPESP1Q6UW49 350 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 ADGRF3Q8IZF5 1079 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 ZBTB2Q8N680 514 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 C19orf47Q8N9M1 422 aaKnown RBP17.21■□□□□ 0.35
YIPF3-208ENST00000490447 SSC4DQ8WTU2 575 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 NLE1Q9NVX2 485 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-208ENST00000490447 LUZP4Q9P127 313 aa17.21■□□□□ 0.35
YIPF3-208ENST00000490447 PLEKHB1Q9UF11 243 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-208ENST00000490447 TNRC6AQ8NDV7 1962 aaKnown RBP17.21■□□□□ 0.35
YIPF3-208ENST00000490447 TRBV5-4A0A0C4DH59 114 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 GOLGA6L9A6NEM1 432 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 LIN7AO14910 233 aaPredicted RBP17.21■□□□□ 0.34
YIPF3-208ENST00000490447 AP2A2O94973 939 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 OTX2P32243 289 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 SHMT2P34897 504 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 CACNG1Q06432 222 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 RAPSNQ13702 412 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 MLIPQ5VWP3 458 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 TMTC1Q8IUR5 882 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 CLDN19Q8N6F1 224 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 GLIS1Q8NBF1 620 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 CLEC1AQ8NC01 280 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 PNPLA2Q96AD5 504 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 TCTN2Q96GX1 697 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 IP6K3Q96PC2 410 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 NRTNQ99748 197 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 IRAK4Q9NWZ3 460 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 SMARCAL1Q9NZC9 954 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 ASF1AQ9Y294 204 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 AP1M2Q9Y6Q5 423 aa17.21■□□□□ 0.34
YIPF3-208ENST00000490447 KDM1AO60341 852 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 OR2B3O76000 313 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 FTH1P02794 183 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 CD63P08962 238 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 PRSS56P0CW18 603 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 NSG1P42857 185 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 POU6F1Q14863 301 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 ZNF658BQ4V348 819 aaPredicted RBP17.2■□□□□ 0.34
YIPF3-208ENST00000490447 SYTL3Q4VX76 610 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 SLC6A19Q695T7 634 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 STYXQ8WUJ0 223 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 ELMO1Q92556 727 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 FER1L6-AS2Q96M78 137 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 TXLNGQ9NUQ3 528 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 CUEDC1Q9NWM3 386 aaPredicted RBP17.2■□□□□ 0.34
YIPF3-208ENST00000490447 NDOR1Q9UHB4 597 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 POLG2Q9UHN1 485 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 ICKQ9UPZ9 632 aa17.2■□□□□ 0.34
YIPF3-208ENST00000490447 PRRC2CQ9Y520 2896 aaKnown RBP17.19■□□□□ 0.34
YIPF3-208ENST00000490447 SPTAN1Q13813 2472 aaKnown RBP17.19■□□□□ 0.34
YIPF3-208ENST00000490447 PEX12O00623 359 aa17.19■□□□□ 0.34
YIPF3-208ENST00000490447 IGHEP01854 428 aa17.19■□□□□ 0.34
YIPF3-208ENST00000490447 ALPPP05187 535 aa17.19■□□□□ 0.34
YIPF3-208ENST00000490447 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
YIPF3-208ENST00000490447 UGT2B7P16662 529 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms