RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 OR5AP2Q8NGF4 316 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 CEP295NLQ96MC4 621 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 OR6C1Q96RD1 312 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 FNBP1Q96RU3 617 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 KRT12Q99456 494 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 C16orf70Q9BSU1 422 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 CLEC7AQ9BXN2 247 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 A4GALTQ9NPC4 353 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 OLA1Q9NTK5 396 aaKnown RBP3.24□□□□□ -1.89
HMGN1-218ENST00000490032 TAS2R14Q9NYV8 317 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 ERAP1Q9NZ08 941 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 RHCGQ9UBD6 479 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 ZDHHC2Q9UIJ5 367 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 GAPDHSO14556 408 aaPredicted RBP3.23□□□□□ -1.89
HMGN1-218ENST00000490032 SSX4O60224 188 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 MITFO75030 526 aaPredicted RBP3.23□□□□□ -1.89
HMGN1-218ENST00000490032 GATA2P23769 480 aaPredicted RBP3.23□□□□□ -1.89
HMGN1-218ENST00000490032 SHC1P29353 583 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 SLC6A6P31641 620 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 CSRP3P50461 194 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 SETQ01105 290 aaPredicted RBP3.23□□□□□ -1.89
HMGN1-218ENST00000490032 GLIPR1L2Q4G1C9 344 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 TCTEX1D4Q5JR98 221 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 HAUS3Q68CZ6 603 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 ADGRF2Q8IZF7 708 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 PAPD5Q8NDF8 572 aaKnown RBP3.23□□□□□ -1.89
HMGN1-218ENST00000490032 UCMAQ8WVF2 138 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 CCDC34Q96HJ3 373 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 BTBD10Q9BSF8 475 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 FUCA2Q9BTY2 467 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 ATP13A3Q9H7F0 1226 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 CCDC177Q9NQR7 707 aaPredicted RBP3.23□□□□□ -1.89
HMGN1-218ENST00000490032 RIPK3Q9Y572 518 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 CSAG2Q9Y5P2 127 aa3.23□□□□□ -1.89
HMGN1-218ENST00000490032 LNP1A1A4G5 178 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 PI15O43692 258 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 USO1O60763 962 aaKnown RBP3.22□□□□□ -1.89
HMGN1-218ENST00000490032 SRSF10O75494 262 aaKnown RBP3.22□□□□□ -1.89
HMGN1-218ENST00000490032 CREG1O75629 220 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 DUS4LO95620 317 aaKnown RBP3.22□□□□□ -1.89
HMGN1-218ENST00000490032 CLTBP09497 229 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 ACADMP11310 421 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 MMP9P14780 707 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 MAPK4P31152 587 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 SUOXP51687 545 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 GSDMDP57764 484 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 HERV-K104P61576 105 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 CXCL9Q07325 125 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 AIMP2Q13155 320 aaKnown RBP3.22□□□□□ -1.89
HMGN1-218ENST00000490032 ENPP2Q13822 863 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 KRT32Q14532 448 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 FASTKD1Q53R41 847 aaKnown RBP3.22□□□□□ -1.89
HMGN1-218ENST00000490032 BSPRYQ5W0U4 402 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 EXOC8Q8IYI6 725 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 RAB42Q8N4Z0 105 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 TRIML1Q8N9V2 468 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 KBTBD8Q8NFY9 601 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 MOSPD2Q8NHP6 518 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 ZFAND2BQ8WV99 257 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 NSMCE3Q96MG7 304 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 ZNF300Q96RE9 604 aaPredicted RBP3.22□□□□□ -1.89
HMGN1-218ENST00000490032 CHMP1AQ9HD42 196 aaPredicted RBP3.22□□□□□ -1.89
HMGN1-218ENST00000490032 KLK13Q9UKR3 277 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 MTUS1Q9ULD2 1270 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.22□□□□□ -1.891e-14■■■□□ 15.4
HMGN1-218ENST00000490032 ADAMTS9Q9P2N4 1935 aa3.22□□□□□ -1.89
HMGN1-218ENST00000490032 ZNF541Q9H0D2 1346 aa3.21□□□□□ -1.89
HMGN1-218ENST00000490032 ZNF644Q9H582 1327 aaPredicted RBP3.21□□□□□ -1.89
HMGN1-218ENST00000490032 MEX3AA1L020 520 aaKnown RBP3.21□□□□□ -1.9
HMGN1-218ENST00000490032 PI4KAP2A4QPH2 592 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 HEPACAM2A8MVW5 462 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 RNASEH1O60930 286 aaKnown RBP3.21□□□□□ -1.9
HMGN1-218ENST00000490032 DFFBO76075 338 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 UGT1A4P22310 534 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 HNF4AP41235 474 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 GARSP41250 739 aaKnown RBP3.21□□□□□ -1.9
HMGN1-218ENST00000490032 DRP2Q13474 957 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 C2CD6Q53TS8 623 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 FIP1L1Q6UN15 594 aaKnown RBP3.21□□□□□ -1.9
HMGN1-218ENST00000490032 LRRTM1Q86UE6 522 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 ERC1Q8IUD2 1116 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 LACC1Q8IV20 430 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 PRSS33Q8NF86 280 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 OR13J1Q8NGT2 312 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 FOXN4Q96NZ1 517 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 RTN4RQ9BZR6 473 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 HRH4Q9H3N8 390 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 LARSQ9P2J5 1176 aaKnown RBP3.21□□□□□ -1.9
HMGN1-218ENST00000490032 LRWD1Q9UFC0 647 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 WDR37Q9Y2I8 494 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 ZNF318Q5VUA4 2279 aa3.21□□□□□ -1.9
HMGN1-218ENST00000490032 PGPEP1LA6NFU8 196 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 LRRC72A6NJI9 287 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 KPNA7A9QM74 516 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 MBD4O95243 580 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 CLDN1O95832 211 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 WDPCPO95876 746 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 ZSCAN5DPP0CG00 497 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 AZU1P20160 251 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 DMPKQ09013 629 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms