RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 GALNT16Q8N428 558 aa18.44■□□□□ 0.54
GGPS1-206ENST00000488594 PROKR1Q8TCW9 393 aa18.44■□□□□ 0.54
GGPS1-206ENST00000488594 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.44■□□□□ 0.54
GGPS1-206ENST00000488594 FERMT1Q9BQL6 677 aa18.44■□□□□ 0.54
GGPS1-206ENST00000488594 OR52A5Q9H2C5 316 aa18.44■□□□□ 0.54
GGPS1-206ENST00000488594 ACTR10Q9NZ32 417 aa18.44■□□□□ 0.54
GGPS1-206ENST00000488594 INTUQ9ULD6 942 aa18.44■□□□□ 0.54
GGPS1-206ENST00000488594 AAR2Q9Y312 384 aaKnown RBP18.44■□□□□ 0.54
GGPS1-206ENST00000488594 ITPR2Q14571 2701 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 LDB2O43679 373 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 OR2B3O76000 313 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 GSTM1P09488 218 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 PVRP15151 417 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 SOX8P57073 446 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 GSTM4Q03013 218 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 LLGL1Q15334 1064 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 MLIPQ5VWP3 458 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 RHBDD2Q6NTF9 364 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 SNX20Q7Z614 316 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 TICAM1Q8IUC6 712 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 ZADH2Q8N4Q0 377 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 BARD1Q99728 777 aaKnown RBP18.43■□□□□ 0.54
GGPS1-206ENST00000488594 CHRNA10Q9GZZ6 450 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 KLHL25Q9H0H3 589 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 SPTLC3Q9NUV7 552 aa18.43■□□□□ 0.54
GGPS1-206ENST00000488594 PTRH2Q9Y3E5 179 aaKnown RBP18.43■□□□□ 0.54
GGPS1-206ENST00000488594 COPG1Q9Y678 874 aaKnown RBP18.43■□□□□ 0.54
GGPS1-206ENST00000488594 PRRC2CQ9Y520 2896 aaKnown RBP18.43■□□□□ 0.54
GGPS1-206ENST00000488594 ZRANB2O95218 330 aaKnown RBP eCLIP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 DCDP81605 110 aaKnown RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 GPR33Q49SQ1 333 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 SPESP1Q6UW49 350 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 KATNAL2Q8IYT4 538 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 RCOR2Q8IZ40 523 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 ADGRF3Q8IZF5 1079 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 C19orf47Q8N9M1 422 aaKnown RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 TTC13Q8NBP0 860 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 OR2Y1Q8NGV0 311 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 TFGQ92734 400 aaPredicted RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 HAUS1Q96CS2 278 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 AP1M1Q9BXS5 423 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 ZNF552Q9H707 407 aaPredicted RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 NHEJ1Q9H9Q4 299 aaPredicted RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 AGPAT4Q9NRZ5 378 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 P4HTMQ9NXG6 502 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 NDOR1Q9UHB4 597 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 SRPK3Q9UPE1 567 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 hCG_1818297A0A087WSY0 165 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 SYCE3A1L190 88 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 SPTBP11277 2137 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 ADRA1AP35348 466 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 BOP1Q14137 746 aaKnown RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 PRPSAP1Q14558 356 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 ZNF658BQ4V348 819 aaPredicted RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 CRB2Q5IJ48 1285 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 Q6ZS92 163 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 PHC3Q8NDX5 983 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 NACC2Q96BF6 587 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 PTERQ96BW5 349 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 GBP5Q96PP8 586 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 CHP1Q99653 195 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 HGH1Q9BTY7 390 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 ABHD10Q9NUJ1 306 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 ZDHHC3Q9NYG2 299 aa18.42■□□□□ 0.54
GGPS1-206ENST00000488594 IFT80Q9P2H3 777 aaPredicted RBP18.42■□□□□ 0.54
GGPS1-206ENST00000488594 SEC16AO15027 2179 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 CACNA1DQ01668 2161 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 IGLV3-16A0A075B6K0 115 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 H3BMH7 237 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 ZSCAN9O15535 394 aaPredicted RBP18.41■□□□□ 0.54
GGPS1-206ENST00000488594 TPM1P09493 284 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 CBSLP0DN79 551 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 SHMT2P34897 504 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 CBSP35520 551 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 ZNF140P52738 457 aaPredicted RBP18.41■□□□□ 0.54
GGPS1-206ENST00000488594 PRKG2Q13237 762 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 CCDC50Q8IVM0 306 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 SLC34A3Q8N130 599 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 OR13C4Q8NGS5 318 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 UBE2Q2Q8WVN8 375 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 PPP1R2P1Q96PQ5 205 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 RANBP9Q96S59 729 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 GORASP1Q9BQQ3 440 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 XKR8Q9H6D3 395 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 FAM60AQ9NP50 221 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 ATP13A2Q9NQ11 1180 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 FEZ2Q9UHY8 353 aaPredicted RBP18.41■□□□□ 0.54
GGPS1-206ENST00000488594 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.41■□□□□ 0.54
GGPS1-206ENST00000488594 PCDHGA10Q9Y5H3 936 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 ALG6Q9Y672 507 aa18.41■□□□□ 0.54
GGPS1-206ENST00000488594 PCSK5Q92824 1860 aa18.4■□□□□ 0.54
GGPS1-206ENST00000488594 H7C0C1 242 aa18.4■□□□□ 0.54
GGPS1-206ENST00000488594 APOC4-APOC2K7ER74 178 aa18.4■□□□□ 0.54
GGPS1-206ENST00000488594 APOC2P02655 101 aa18.4■□□□□ 0.54
GGPS1-206ENST00000488594 RBL1P28749 1068 aa18.4■□□□□ 0.54
GGPS1-206ENST00000488594 PDHA2P29803 388 aa18.4■□□□□ 0.54
GGPS1-206ENST00000488594 ATP5OP48047 213 aa18.4■□□□□ 0.54
GGPS1-206ENST00000488594 HADHBP55084 474 aaKnown RBP18.4■□□□□ 0.54
GGPS1-206ENST00000488594 MSLNQ13421 630 aaPredicted RBP18.4■□□□□ 0.54
GGPS1-206ENST00000488594 CYP2A13Q16696 494 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms