RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 IKQ13123 557 aaPredicted RBP3.46□□□□□ -1.86
SMC4-219ENST00000487747 LINGO4Q6UY18 593 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 SCYL3Q8IZE3 742 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 ERLEC1Q96DZ1 483 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 FNBP1Q96RU3 617 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 S1PR5Q9H228 398 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 SMC4Q9NTJ3 1288 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 OSER1Q9NX31 292 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 OSGIN1Q9UJX0 560 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 PPP1R3CQ9UQK1 317 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 MTMR6Q9Y217 621 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 RUSC2Q8N2Y8 1516 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 A0A1B0GVC2 190 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 KPNA7A9QM74 516 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 SRRM5B3KS81 715 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 MAGEC1O60732 1142 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 LIMK2P53671 638 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 CX3CL1P78423 397 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 MELKQ14680 651 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 XKR3Q5GH77 459 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 MDH1BQ5I0G3 518 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 BTN2A1Q7KYR7 527 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 OR13J1Q8NGT2 312 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 OR2L2Q8NH16 312 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 ZNF519Q8TB69 540 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 RFFLQ8WZ73 363 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 SLCO2A1Q92959 643 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 KRT12Q99456 494 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 SRSF8Q9BRL6 282 aaKnown RBP3.45□□□□□ -1.86
SMC4-219ENST00000487747 MTUS1Q9ULD2 1270 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 CORO1CQ9ULV4 474 aaPredicted RBP3.45□□□□□ -1.86
SMC4-219ENST00000487747 NENFQ9UMX5 172 aa3.45□□□□□ -1.86
SMC4-219ENST00000487747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.45□□□□□ -1.862e-11■■■□□ 18.8
SMC4-219ENST00000487747 A8MZ25 164 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 GAPDHSO14556 408 aaPredicted RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 HS6ST1O60243 411 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 RSL1D1O76021 490 aaKnown RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 TPPPO94811 219 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 OR2C1O95371 312 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 SRPRAP08240 638 aaKnown RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 GSCP56915 257 aaPredicted RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 CALCOCO2Q13137 446 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 PEX6Q13608 980 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 SQLEQ14534 574 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 TAF13Q15543 124 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 PHLDA2Q53GA4 152 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 SLC25A30Q5SVS4 291 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 FIP1L1Q6UN15 594 aaKnown RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 PXKQ7Z7A4 578 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 SMAP1Q8IYB5 467 aaPredicted RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 KIRREL3Q8IZU9 778 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 TMTC2Q8N394 836 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 MARVELD2Q8N4S9 558 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 PDILTQ8N807 584 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 Q8NBF4 154 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 SMAP2Q8WU79 429 aaPredicted RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 MTERF3Q96E29 417 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 USP28Q96RU2 1077 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 TRIM6Q9C030 488 aaPredicted RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 PPIL3Q9H2H8 161 aaKnown RBP3.44□□□□□ -1.86
SMC4-219ENST00000487747 SPHK2Q9NRA0 654 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 ZDHHC2Q9UIJ5 367 aa3.44□□□□□ -1.86
SMC4-219ENST00000487747 FRMD3A2A2Y4 597 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 IDH3BO43837 385 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 CCNDBP1O95273 360 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 HSPA1AP0DMV8 641 aaKnown RBP3.43□□□□□ -1.86
SMC4-219ENST00000487747 HSPA1BP0DMV9 641 aaKnown RBP3.43□□□□□ -1.86
SMC4-219ENST00000487747 ACADMP11310 421 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 GABRB1P18505 474 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 CA6P23280 308 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 PGFP49763 221 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 SUOXP51687 545 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 PAX9P55771 341 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 LY6DQ14210 128 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 TMEM95Q3KNT9 176 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 WLSQ5T9L3 541 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 KLHL35Q6PF15 583 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 HPS6Q86YV9 775 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 ZNF584Q8IVC4 421 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 ARID3BQ8IVW6 561 aaPredicted RBP3.43□□□□□ -1.86
SMC4-219ENST00000487747 MIPOL1Q8TD10 442 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 RASL10AQ92737 203 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 CMTM3Q96MX0 182 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 WWTR1Q9GZV5 400 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 ZNF701Q9NV72 531 aaPredicted RBP3.43□□□□□ -1.86
SMC4-219ENST00000487747 TAS2R14Q9NYV8 317 aa3.43□□□□□ -1.86
SMC4-219ENST00000487747 IGLV3-10A0A075B6K4 115 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 DFFBO76075 338 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 C22orf31O95567 290 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 IGHV3-13P01766 116 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 HMGB1P09429 215 aaKnown RBP3.42□□□□□ -1.86
SMC4-219ENST00000487747 PRLRP16471 622 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 PON1P27169 355 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 PAX8Q06710 450 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 FAM98BQ52LJ0 330 aaKnown RBP3.42□□□□□ -1.86
SMC4-219ENST00000487747 Q6ZR54 194 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 TMEM139Q8IV31 216 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 TRIML1Q8N9V2 468 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 ARHGAP45Q92619 1136 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms