RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 CLRN3Q8NCR9 226 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 C9orf43Q8TAL5 461 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 APOBEC4Q8WW27 367 aaKnown RBP5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 EIF3CQ99613 913 aaKnown RBP5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 NUDT22Q9BRQ3 303 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 TEX101Q9BY14 249 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 GSDMCQ9BYG8 508 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 FRMD8Q9BZ67 464 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 DPEP2Q9H4A9 486 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 LRRC19Q9H756 370 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 RDH14Q9HBH5 336 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 PLCB1Q9NQ66 1216 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 FBXO8Q9NRD0 319 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 SPATS2LQ9NUQ6 558 aaKnown RBP5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 AJAP1Q9UKB5 411 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 SLC17A4Q9Y2C5 497 aa5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 ANKRD17O75179 2603 aaKnown RBP5.06□□□□□ -1.6
R3HDM1-218ENST00000487294 LRBAP50851 2863 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 A0A1W2PQ67 120 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 GOLGA6L4A6NEF3 574 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 GOLGA6L3A6NEY3 463 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 B4DGG1 531 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RASA4BC9J798 803 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PSMD11O00231 422 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 TRAFD1O14545 582 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PPM1DO15297 605 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RASA4O43374 803 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 HTRA2O43464 458 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RAD1O60671 282 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PRAMEF11O60813 436 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PIGNO95427 931 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PRKCGP05129 697 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 LPLP06858 475 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 IVLP07476 585 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 XPAP23025 273 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 SERPINA4P29622 427 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CSTF2P33240 577 aaKnown RBP eCLIP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 MAN1A1P33908 653 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 SOX5P35711 763 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 STX17P56962 302 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 OR1D5P58170 312 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 DGCR2P98153 550 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 MC2RQ01718 297 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 DPTQ07507 201 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CDC20Q12834 499 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ILF3Q12906 894 aaKnown RBP eCLIP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 KLRB1Q12918 225 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PTP4A2Q12974 167 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RFTN1Q14699 578 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ELAVL1Q15717 326 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 IGFBP7Q16270 282 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 LACTB2Q53H82 288 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RAB6CQ53S08 254 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CT83Q5H943 113 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 FKBP15Q5T1M5 1219 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 KLHDC7AQ5VTJ3 777 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ISM2Q6H9L7 571 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 TRIM72Q6ZMU5 477 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 Q6ZRM9 215 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 DPPA4Q7L190 304 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ARHGAP22Q7Z5H3 698 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CAMK1DQ8IU85 385 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RAVER1Q8IY67 606 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CCDC185Q8N715 623 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 EMC1Q8N766 993 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 NLGN4YQ8NFZ3 816 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CCL4L1Q8NHW4 92 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CHAC2Q8WUX2 184 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RXFP2Q8WXD0 754 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ART4Q93070 314 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 MIEF2Q96C03 454 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RTP4Q96DX8 246 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 COQ10AQ96MF6 247 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PSKH2Q96QS6 385 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 STK33Q9BYT3 514 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ENKD1Q9H0I2 346 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 RAB6CQ9H0N0 254 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 WDR26Q9H7D7 661 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ATP13A3Q9H7F0 1226 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CATSPERBQ9H7T0 1116 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 MRPL40Q9NQ50 206 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 TAAR2Q9P1P5 351 aa5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 UBA2Q9UBT2 640 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 NOCTQ9UK39 431 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 ZFC3H1O60293 1989 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 PRRC2CQ9Y520 2896 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-218ENST00000487294 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 ANKRD36A6QL64 1941 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 A0A1W2PR48 441 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 TCRBV5S1A1TA0A578 114 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 SIGLEC16A6NMB1 481 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 ENO4A6NNW6 628 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 RHPN2P1A8MT19 583 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 F8VZ95 297 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 GOLGA8SH3BPF8 625 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 NKX2-8O15522 239 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 SOCS5O75159 536 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 ULK1O75385 1050 aa5.04□□□□□ -1.6
R3HDM1-218ENST00000487294 PCCBP05166 539 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms