RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ULK4Q96C45 1275 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 COPS8Q99627 209 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 HGH1Q9BTY7 390 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 FAM60AQ9NP50 221 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 SPTLC3Q9NUV7 552 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 TRHDEQ9UKU6 1024 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 PCDHGA10Q9Y5H3 936 aa18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMPDL3A-202ENST00000487215 C5orf60A6NFR6 353 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 HCRTR1O43613 425 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 SPOPO43791 374 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 KLHL41O60662 606 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 IGHEP01854 428 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 ATXN8OSP0DMR3 200 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 ATP1B2P14415 290 aaPredicted RBP18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 FOXL2P58012 376 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 OLIG2Q13516 323 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 DEFB110Q30KQ9 67 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 RHBDD2Q6NTF9 364 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 SPESP1Q6UW49 350 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 Q6ZS92 163 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 CUZD1Q86UP6 607 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 TRIM73Q86UV7 250 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 C19orf47Q8N9M1 422 aaKnown RBP18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 OR13C4Q8NGS5 318 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 TM9SF4Q92544 642 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 N4BP2L2Q92802 583 aaPredicted RBP18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 GBP5Q96PP8 586 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 DNAJC7Q99615 494 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 APOL2Q9BQE5 337 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 GBA3Q9H227 469 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 MVB12BQ9H7P6 319 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 ZBTB20Q9HC78 741 aaPredicted RBP18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 P4HTMQ9NXG6 502 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 GPN3Q9UHW5 284 aaPredicted RBP18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 AP1M2Q9Y6Q5 423 aa18.8■□□□□ 0.6
SMPDL3A-202ENST00000487215 CFAP99D6REC4 459 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 CNOT3O75175 753 aaKnown RBP18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 OR2B3O76000 313 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 IPO13O94829 963 aaKnown RBP18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 PTMSP20962 102 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 TNFRSF8P28908 595 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 PDHA2P29803 388 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 GLRBP48167 497 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 GABRA4P48169 554 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 CD151P48509 253 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 GEMP55040 296 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 TMPRSS15P98073 1019 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 PRKG2Q13237 762 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 BOP1Q14137 746 aaKnown RBP18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 ZIC1Q15915 447 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 RANBP10Q6VN20 620 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 PPP1R32Q7Z5V6 425 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 TMEM151BQ8IW70 566 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 ZADH2Q8N4Q0 377 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 OR2Y1Q8NGV0 311 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 HEXDCQ8WVB3 486 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 UBE2Q2Q8WVN8 375 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 SPRTNQ9H040 489 aaPredicted RBP18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 IFT80Q9P2H3 777 aaPredicted RBP18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 NDOR1Q9UHB4 597 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 CDYLQ9Y232 598 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 LRBAP50851 2863 aa18.79■□□□□ 0.6
SMPDL3A-202ENST00000487215 hCG_1818297A0A087WSY0 165 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 HACD1B0YJ81 288 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 PSTPIP1O43586 416 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 ANXA9O76027 345 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 CTSBP07858 339 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 ITGALP20701 1170 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 ADRA1AP35348 466 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 ZNF140P52738 457 aaPredicted RBP18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 SOX8P57073 446 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 DCDP81605 110 aaKnown RBP18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 MSLNQ13421 630 aaPredicted RBP18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 SLC9A5Q14940 896 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 TFDP3Q5H9I0 405 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 SNX20Q7Z614 316 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 HOOK3Q86VS8 718 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 PROKR1Q8TCW9 393 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 TFGQ92734 400 aaPredicted RBP18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 CHP1Q99653 195 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 ANP32EQ9BTT0 268 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 C10orf88Q9H8K7 445 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 DHCR7Q9UBM7 475 aaKnown RBP18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 ICKQ9UPZ9 632 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 PIKFYVEQ9Y2I7 2098 aa18.78■□□□□ 0.6
SMPDL3A-202ENST00000487215 FER1L5A0AVI2 2057 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 IGLV3-16A0A075B6K0 115 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 CCL22O00626 93 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 CRTAMO95727 393 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 UMODP07911 640 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 CD63P08962 238 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 UGT2B7P16662 529 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 RBL1P28749 1068 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 RPA4Q13156 261 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 MRPL14Q6P1L8 145 aaKnown RBP18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 MICALCLQ6ZW33 695 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 ST6GALNAC3Q8NDV1 305 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms