RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SNX15Q9NRS6 342 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 KCNK4Q9NYG8 393 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 PLAAQ9Y263 795 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 HEBP2Q9Y5Z4 205 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 COLEC10Q9Y6Z7 277 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 RP1P56715 2156 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 TSPAN12O95859 305 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ALDOAP04075 364 aaKnown RBP17.37■□□□□ 0.37
CPNE1-224ENST00000483359 NUDT17P0C025 328 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 CBSLP0DN79 551 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 CEACAM1P13688 526 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-224ENST00000483359 CBSP35520 551 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ILF2Q12905 390 aaKnown RBP17.37■□□□□ 0.37
CPNE1-224ENST00000483359 NKAIN2Q5VXU1 208 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ADGRD1Q6QNK2 874 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 AVL9Q8NBF6 648 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 OR6C4Q8NGE1 309 aa17.37■□□□□ 0.37
CPNE1-224ENST00000483359 ASXL3Q9C0F0 2248 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 RFPL3O75679 317 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 KRT37O76014 449 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 FTH1P19P0C7X4 201 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 SDHBP21912 280 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 TYK2P29597 1187 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 SERPINB8P50452 374 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 CCSMST1Q4G0I0 132 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 PPM1JQ5JR12 505 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 UNC5DQ6UXZ4 953 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 SPRED1Q7Z699 444 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 OR52E1Q8NGJ3 308 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 KIR3DX1Q9H7L2 352 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 SYTL2Q9HCH5 934 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 DLL3Q9NYJ7 618 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 SLC24A2Q9UI40 661 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 ADAMTS6Q9UKP5 1117 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 IKZF3Q9UKT9 509 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 PCNX2A6NKB5 2137 aa17.36■□□□□ 0.37
CPNE1-224ENST00000483359 TLDC2A0PJX2 215 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 MATN4O95460 622 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 RPLP0P05388 317 aaKnown RBP17.35■□□□□ 0.37
CPNE1-224ENST00000483359 SLC35E2BP0CK96 405 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 TYRP1P17643 537 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 CLDN6P56747 220 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 IRF9Q00978 393 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 CYHR1Q6ZMK1 362 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 ZNF438Q7Z4V0 828 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 GLRX5Q86SX6 157 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 SLCO6A1Q86UG4 719 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 TBC1D21Q8IYX1 336 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 SH3KBP1Q96B97 665 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-224ENST00000483359 ABCG4Q9H172 646 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 XKR8Q9H6D3 395 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 MVB12BQ9H7P6 319 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 RDH14Q9HBH5 336 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 POPDC3Q9HBV1 291 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 FETUBQ9UGM5 382 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 FOXO6A8MYZ6 492 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 C1orf105O95561 183 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 SNRPAP09012 282 aaKnown RBP17.35■□□□□ 0.37
CPNE1-224ENST00000483359 CCDC166P0CW27 439 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 MPC1LP0DKB6 136 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 CNTFP26441 200 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 NDUFS1P28331 727 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 CSHL1Q14406 222 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.35■□□□□ 0.37
CPNE1-224ENST00000483359 BEND6Q5SZJ8 279 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-224ENST00000483359 DHRS13Q6UX07 377 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 NEK10Q6ZWH5 1172 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 UBE2R2Q712K3 238 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-224ENST00000483359 DCUN1D3Q8IWE4 304 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 VPS11Q9H270 941 aa17.35■□□□□ 0.37
CPNE1-224ENST00000483359 CNOT1A5YKK6 2376 aaKnown RBP17.35■□□□□ 0.37
CPNE1-224ENST00000483359 A0A096LPK6 155 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 IQANK1A0A1B0GTG1 560 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 NPEPPSL1A6NEC2 478 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 ARHGEF33A8MVX0 844 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 EIF3FO00303 357 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-224ENST00000483359 B4GAT1O43505 415 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 WISP3O95389 354 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-224ENST00000483359 SYF2O95926 243 aaKnown RBP17.34■□□□□ 0.37
CPNE1-224ENST00000483359 RPN2P04844 631 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 CCL7P80098 99 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 LGSNQ5TDP6 509 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 LRRC8EQ6NSJ5 796 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 RBM12BQ8IXT5 1001 aaKnown RBP17.34■□□□□ 0.37
CPNE1-224ENST00000483359 NKAPQ8N5F7 415 aaKnown RBP17.34■□□□□ 0.37
CPNE1-224ENST00000483359 LMNTD1Q8N9Z9 388 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 OR4E2Q8NGC2 313 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 OR10G6Q8NH81 332 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 RSC1A1Q92681 617 aa17.34■□□□□ 0.37
CPNE1-224ENST00000483359 AHCYL2Q96HN2 611 aaKnown RBP17.34■□□□□ 0.37
CPNE1-224ENST00000483359 ATXN7L1Q9ULK2 861 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-224ENST00000483359 IGHV1OR21-1A0A087WYE8 117 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 A0A1W2PQM1 296 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 LILRA5A6NI73 299 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 BTN3A1O00481 513 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 PSIP1O75475 530 aaKnown RBP17.33■□□□□ 0.37
CPNE1-224ENST00000483359 CATP04040 527 aaKnown RBP17.33■□□□□ 0.37
CPNE1-224ENST00000483359 C2P06681 752 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms