RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MAPRE2Q15555 327 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 CNGA3Q16281 694 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 ZNF470Q6ECI4 717 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 ESRP1Q6NXG1 681 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 C16orf89Q6UX73 402 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 ARHGAP36Q6ZRI8 547 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 ZCCHC23Q6ZST2 131 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 CTU1Q7Z7A3 348 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 ADGRG6Q86SQ4 1221 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 CXorf67Q86X51 503 aaPredicted RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 HERC6Q8IVU3 1022 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 FAM126BQ8IXS8 530 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 OXR1Q8N573 874 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 CPSF7Q8N684 471 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 ATAD1Q8NBU5 361 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 DBF4BQ8NFT6 615 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 RP9Q8TA86 221 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 ACTRT2Q8TDY3 377 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 ZUFSPQ96AP4 578 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 RGMAQ96B86 450 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 MTFMTQ96DP5 389 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 PABPC5Q96DU9 382 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 HMCESQ96FZ2 354 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 ELMO2Q96JJ3 720 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 CAPNS2Q96L46 248 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 PTCHD1Q96NR3 888 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 KCNC2Q96PR1 638 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 SEPT5Q99719 369 aaPredicted RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 APOL2Q9BQE5 337 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 GATA5Q9BWX5 397 aaPredicted RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 NACA2Q9H009 215 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 CWH43Q9H720 699 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 COG4Q9H9E3 785 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 CYP4F11Q9HBI6 524 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 TCF7L2Q9NQB0 619 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 PFDN4Q9NQP4 134 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 INTS10Q9NVR2 710 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 TRPM5Q9NZQ8 1165 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 MPP6Q9NZW5 540 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 MARCOQ9UEW3 520 aaPredicted RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 AFF4Q9UHB7 1163 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 PRPF19Q9UMS4 504 aaKnown RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 C19orf53Q9UNZ5 99 aaPredicted RBP7.63□□□□□ -1.19
SNX13-208ENST00000482558 CDYLQ9Y232 598 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 VWA7Q9Y334 891 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 MYO16Q9Y6X6 1858 aa7.63□□□□□ -1.19
SNX13-208ENST00000482558 SHROOM3Q8TF72 1996 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 UTRNP46939 3433 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 TYW5A2RUC4 315 aaKnown RBP7.62□□□□□ -1.19
SNX13-208ENST00000482558 RGSL1A5PLK6 1076 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 PRR5-ARHGAP8B1AHC4 643 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 TARM1B6A8C7 271 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 RTCAO00442 366 aaKnown RBP7.62□□□□□ -1.19
SNX13-208ENST00000482558 KDELR3O43731 214 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 CCNT2O60583 730 aaKnown RBP7.62□□□□□ -1.19
SNX13-208ENST00000482558 PSMG1O95456 288 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 NDST3O95803 873 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 ACADSP16219 412 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 SYN1P17600 705 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 TFEBP19484 476 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 CTSSP25774 331 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 SLC1A2P43004 574 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 SLC11A1P49279 550 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 MAP2K6P52564 334 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 ACTR3P61158 418 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 ARHGAP8P85298 464 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 XIAPP98170 497 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 KDSRQ06136 332 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 PLD1Q13393 1074 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 LAPTM5Q13571 262 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 NAA25Q14CX7 972 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 VEPH1Q14D04 833 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 MUM1Q2TAK8 710 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 RAP1GAP2Q684P5 730 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 CNKSR3Q6P9H4 555 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 BTN2A1Q7KYR7 527 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 TTC7BQ86TV6 843 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 MIB1Q86YT6 1006 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 CCDC103Q8IW40 242 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 ULK2Q8IYT8 1036 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 CENPLQ8N0S6 344 aaPredicted RBP7.62□□□□□ -1.19
SNX13-208ENST00000482558 FSTL5Q8N475 847 aaPredicted RBP7.62□□□□□ -1.19
SNX13-208ENST00000482558 MAB21L3Q8N8X9 362 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 NETO2Q8NC67 525 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 RBM15BQ8NDT2 890 aaKnown RBP7.62□□□□□ -1.19
SNX13-208ENST00000482558 TOR1AIP2Q8NFQ8 470 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 CEP70Q8NHQ1 597 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 ARRDC2Q8TBH0 407 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 CD99L2Q8TCZ2 262 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 PSMG2Q969U7 264 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 MSLNLQ96KJ4 702 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 PSKH2Q96QS6 385 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 YME1L1Q96TA2 773 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 MGME1Q9BQP7 344 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 ADGRE3Q9BY15 652 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 C20orf27Q9GZN8 174 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 SYTL2Q9HCH5 934 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 TM7SF3Q9NS93 570 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 PNPOQ9NVS9 261 aa7.62□□□□□ -1.19
SNX13-208ENST00000482558 MARCH5Q9NX47 278 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms