RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 PRR11Q96HE9 360 aaPredicted RBP10.31□□□□□ -0.76
SSBP1-210ENST00000481508 C9orf72Q96LT7 481 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 CCDC74BQ96LY2 380 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 DEPDC7Q96QD5 511 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 NDNQ99608 321 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 TTC1Q99614 292 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 FAM167BQ9BTA0 163 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 VPS37BQ9H9H4 285 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 UCK1Q9HA47 277 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 INTS10Q9NVR2 710 aaKnown RBP10.31□□□□□ -0.76
SSBP1-210ENST00000481508 SLC24A2Q9UI40 661 aa10.31□□□□□ -0.76
SSBP1-210ENST00000481508 UBR5O95071 2799 aaPredicted RBP10.31□□□□□ -0.76
SSBP1-210ENST00000481508 KLHL33A6NCF5 533 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 CXorf49A8MYA2 514 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 J3QKU1 62 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 QSOX1O00391 747 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 LIN7AO14910 233 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 ATXN7O15265 892 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 CPNE6O95741 557 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 TTC4O95801 387 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 C1QAP02745 245 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 MPOP05164 745 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 PKMP14618 531 aaKnown RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 PPARGP37231 505 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 BDKRB1P46663 353 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 CLCN7P51798 805 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 EPHA4P54764 986 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 INHBCP55103 352 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 ADARP55265 1226 aaKnown RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 HSPA14Q0VDF9 509 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 RPA4Q13156 261 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 PRKG2Q13237 762 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 SQSTM1Q13501 440 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 CUL1Q13616 776 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 TUBB2AQ13885 445 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 GBX1Q14549 363 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 ACSBG2Q5FVE4 666 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 C3orf38Q5JPI3 329 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 RNF187Q5TA31 235 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 PIM3Q86V86 326 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 CCDC25Q86WR0 208 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 LRRC6Q86X45 466 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 SLC22A15Q8IZD6 547 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 SIDT2Q8NBJ9 832 aaKnown RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 MNS1Q8NEH6 495 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 OR10G6Q8NH81 332 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 NCSTNQ92542 709 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 SH3KBP1Q96B97 665 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 LRRC39Q96DD0 335 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 PPM1MQ96MI6 270 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 FERD3LQ96RJ6 166 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 TCF12Q99081 682 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 NAT9Q9BTE0 207 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 HGH1Q9BTY7 390 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 TUBB2BQ9BVA1 445 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 STN1Q9H668 368 aaKnown RBP10.3□□□□□ -0.76
SSBP1-210ENST00000481508 XKR8Q9H6D3 395 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 KIR3DX1Q9H7L2 352 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 L2HGDHQ9H9P8 463 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 MOCS1Q9NZB8 636 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 KLHL3Q9UH77 587 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 CIDEBQ9UHD4 219 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 PLAGL1Q9UM63 463 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 SATB2Q9UPW6 733 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 NFS1Q9Y697 457 aa10.3□□□□□ -0.76
SSBP1-210ENST00000481508 A8MU76 341 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 DUX1O43812 170 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 KIF1CO43896 1103 aaKnown RBP10.29□□□□□ -0.76
SSBP1-210ENST00000481508 UBXN7O94888 489 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 SLCO2B1O94956 709 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 AHSGP02765 367 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 ESR1P03372 595 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 GSTM1P09488 218 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 THRAP10827 490 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 CCKBRP32239 447 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 ETV5P41161 510 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 LIMK2P53671 638 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 GPLD1P80108 840 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 GSTM4Q03013 218 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 CYP4F3Q08477 520 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 ABRQ12979 859 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 FRG1Q14331 258 aaKnown RBP10.29□□□□□ -0.76
SSBP1-210ENST00000481508 GRB7Q14451 532 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 EFTUD2Q15029 972 aaKnown RBP eCLIP10.29□□□□□ -0.764e-17■□□□□ 11.1
SSBP1-210ENST00000481508 CCSMST1Q4G0I0 132 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 SNAP47Q5SQN1 464 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 PHF19Q5T6S3 580 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 LMNTD2Q8IXW0 634 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 CEP112Q8N8E3 955 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 AVL9Q8NBF6 648 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 OR52E1Q8NGJ3 308 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 WDR48Q8TAF3 677 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 GSDMBQ8TAX9 411 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 CD200R1Q8TD46 325 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 CALML6Q8TD86 181 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 PYROXD1Q8WU10 500 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 TFGQ92734 400 aaPredicted RBP10.29□□□□□ -0.76
SSBP1-210ENST00000481508 PMEPA1Q969W9 287 aa10.29□□□□□ -0.76
SSBP1-210ENST00000481508 TMEM159Q96B96 161 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms