RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 BST1Q10588 318 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 UNC5DQ6UXZ4 953 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 NRROSQ86YC3 692 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 CCNYL1Q8N7R7 359 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 ZBTB44Q8NCP5 570 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 PHC3Q8NDX5 983 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 TFGQ92734 400 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-206ENST00000480362 INSM2Q96T92 566 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-206ENST00000480362 PRDM8Q9NQV8 689 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 TMEM74BQ9NUR3 256 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 ARL15Q9NXU5 204 aa17.15■□□□□ 0.34
UPF3A-206ENST00000480362 A0A1B0GTW7 788 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 GMNCA6NCL1 334 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 PABPN1LA6NDY0 278 aaKnown RBP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 LRRC14BA6NHZ5 514 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 PRR5-ARHGAP8B1AHC4 643 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 STX16-NPEPL1H3BU86 382 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 STX16O14662 325 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 CSF2P04141 144 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 VIMP08670 466 aaKnown RBP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 ANXA5P08758 320 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 GNSP15586 552 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 GRK2P25098 689 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 ACTR1BP42025 376 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 SEC24CP53992 1094 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 ACTR1AP61163 376 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 CDKL1Q00532 357 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 ILF3Q12906 894 aaKnown RBP eCLIP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 CLCA4Q14CN2 919 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 SETDB1Q15047 1291 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 TEAD4Q15561 434 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 C18orf21Q32NC0 220 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 UAP1L1Q3KQV9 507 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 CCSMST1Q4G0I0 132 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 UNC50Q53HI1 259 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 FBXO48Q5FWF7 155 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 CDKL4Q5MAI5 379 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 SULT1C3Q6IMI6 304 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 SLC30A9Q6PML9 568 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 MBOAT1Q6ZNC8 495 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 LRRC34Q8IZ02 419 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 PDPRQ8NCN5 879 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 GPBAR1Q8TDU6 330 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 RHBDF1Q96CC6 855 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 L3HYPDHQ96EM0 354 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 CHMP6Q96FZ7 201 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 ZNF317Q96PQ6 595 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 TMEM237Q96Q45 408 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 GSDMCQ9BYG8 508 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 TBC1D29Q9UFV1 150 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 PTBP2Q9UKA9 531 aaKnown RBP17.14■□□□□ 0.33
UPF3A-206ENST00000480362 ASF1AQ9Y294 204 aa17.14■□□□□ 0.33
UPF3A-206ENST00000480362 KRT87PA6NCN2 255 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 TMEM114B3SHH9 223 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 TAPBPO15533 448 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 ITM2AO43736 263 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 SIX3O95343 332 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 NME1P15531 152 aaKnown RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 EEF1DP29692 281 aaKnown RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 SLC1A6P48664 564 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 AGTR2P50052 363 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 AP1S2P56377 157 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 ABCE1P61221 599 aaKnown RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 HERVK_113P63132 956 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 C1orf61Q13536 156 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 CFAP157Q5JU67 520 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 ZNF678Q5SXM1 525 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 ABRAXAS1Q6UWZ7 409 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 WASH2PQ6VEQ5 465 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 FAM47EQ6ZV65 393 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 FBXO15Q8NCQ5 510 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 OR5AR1Q8NGP9 310 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 MAGEC3Q8TD91 643 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 ESAMQ96AP7 390 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 C12orf66Q96MD2 445 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 PKP4Q99569 1192 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 ERVK-6Q9BXR3 956 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 C20orf27Q9GZN8 174 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 ZNF395Q9H8N7 513 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 SLCO1B3Q9NPD5 702 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 WASH6PQ9NQA3 447 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 WWOXQ9NZC7 414 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 SUSD2Q9UGT4 822 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 APOBEC3BQ9UH17 382 aaKnown RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 PILRBQ9UKJ0 227 aa17.13■□□□□ 0.33
UPF3A-206ENST00000480362 CFAP20Q9Y6A4 193 aaKnown RBP17.13■□□□□ 0.33
UPF3A-206ENST00000480362 A0A1B0GVT2 93 aa17.12■□□□□ 0.33
UPF3A-206ENST00000480362 GALR2O43603 387 aaPredicted RBP17.12■□□□□ 0.33
UPF3A-206ENST00000480362 NPHS1O60500 1241 aa17.12■□□□□ 0.33
UPF3A-206ENST00000480362 SNNO75324 88 aaPredicted RBP17.12■□□□□ 0.33
UPF3A-206ENST00000480362 LYPLA1O75608 230 aaPredicted RBP17.12■□□□□ 0.33
UPF3A-206ENST00000480362 SUPT7LO94864 414 aa17.12■□□□□ 0.33
UPF3A-206ENST00000480362 EML2O95834 649 aa17.12■□□□□ 0.33
UPF3A-206ENST00000480362 CELA2BP08218 269 aaPredicted RBP17.12■□□□□ 0.33
UPF3A-206ENST00000480362 HALP42357 657 aa17.12■□□□□ 0.33
UPF3A-206ENST00000480362 PRRT3Q5FWE3 981 aa17.12■□□□□ 0.33
UPF3A-206ENST00000480362 PRAMEF14Q5SWL7 426 aa17.12■□□□□ 0.33
UPF3A-206ENST00000480362 ANKS6Q68DC2 871 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms