RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 EPORP19235 508 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 ACRV1P26436 265 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 HTR1EP28566 365 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 PSMD7P51665 324 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 GRIK2Q13002 908 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 LAPTM4AQ15012 233 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 KCTD21Q4G0X4 260 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 GPRC6AQ5T6X5 926 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 ZBTB2Q8N680 514 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 BPIFB6Q8NFQ5 453 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 TSPEARQ8WU66 669 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 GTF2H4Q92759 462 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 CD244Q9BZW8 370 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 HPS4Q9NQG7 708 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 AASSQ9UDR5 926 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 DLGAP4Q9Y2H0 992 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 DOCK6Q96HP0 2047 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 OTCP00480 354 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 ZNF182P17025 639 aaPredicted RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 TACR1P25103 407 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 B4GALNT1Q00973 533 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PWP1Q13610 501 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 SF1Q15637 639 aaKnown RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 LDLRAP1Q5SW96 308 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 GAREM2Q75VX8 874 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 EFL1Q7Z2Z2 1120 aaKnown RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 SNX20Q7Z614 316 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 VRK3Q8IV63 474 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 RNF168Q8IYW5 571 aaPredicted RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 TBC1D21Q8IYX1 336 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 RBFAQ8N0V3 343 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PARP8Q8N3A8 854 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 DPP10Q8N608 796 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PDPRQ8NCN5 879 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PAPD5Q8NDF8 572 aaKnown RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 ITFG1Q8TB96 612 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 BPIFB1Q8TDL5 484 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 SKA2Q8WVK7 121 aaPredicted RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 OVCA2Q8WZ82 227 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PDLIM5Q96HC4 596 aaKnown RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 FAM126AQ9BYI3 521 aaPredicted RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 PAIP1Q9H074 479 aaKnown RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 HIPK3Q9H422 1215 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 FANCEQ9HB96 536 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 CFAP97Q9P2B7 532 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 OPTCQ9UBM4 332 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PCDHGA11Q9Y5H2 935 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 J3QRK9 145 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 GLUD1P00367 558 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 ALBP02768 609 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 CKMP06732 381 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 CD9P21926 228 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 GABRR2P28476 465 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 CCR7P32248 378 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PIGAP37287 484 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 MTHFRP42898 656 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 HSPA14Q0VDF9 509 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 MTA1Q13330 715 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 ATP13A5Q4VNC0 1218 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 ZNF648Q5T619 568 aaPredicted RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 IRAK1BP1Q5VVH5 260 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 CRTC1Q6UUV9 634 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PATL1Q86TB9 770 aaKnown RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 CMTM8Q8IZV2 173 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 STK40Q8N2I9 435 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PACRGLQ8N7B6 248 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 HJURPQ8NCD3 748 aaPredicted RBP10.58□□□□□ -0.72
VPS52-217ENST00000478934 TNIP2Q8NFZ5 429 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 SLC13A3Q8WWT9 602 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 FOXJ1Q92949 421 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 FBXL8Q96CD0 374 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 VWCEQ96DN2 955 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 THAP11Q96EK4 314 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 EGLN2Q96KS0 407 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 INPP5KQ9BT40 448 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 BEGAINQ9BUH8 593 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 LIMD1Q9UGP4 676 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 GNPTGQ9UJJ9 305 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 OARD1Q9Y530 152 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 MYOFQ9NZM1 2061 aa10.58□□□□□ -0.72
VPS52-217ENST00000478934 SH3BGRLO75368 114 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ULK1O75385 1050 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ITGALP20701 1170 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 LHCGRP22888 699 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 MRPL19P49406 292 aaKnown RBP10.57□□□□□ -0.72
VPS52-217ENST00000478934 ARSFP54793 590 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 VEPH1Q14D04 833 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 LRRC66Q68CR7 880 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 Q6ZNB5 142 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 GCNT7Q6ZNI0 430 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 TMEM179BQ7Z7N9 219 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 GALNT10Q86SR1 603 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ZC3H7AQ8IWR0 971 aaKnown RBP10.57□□□□□ -0.72
VPS52-217ENST00000478934 DCAF4L2Q8NA75 395 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 MIPOL1Q8TD10 442 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ING2Q9H160 280 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ADGRE2Q9UHX3 823 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms