RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ASB14A6NK59 587 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 HOXC11O43248 304 aaPredicted RBP2.46□□□□□ -2.02
HPS3-205ENST00000478525 HOXD4P09016 255 aaPredicted RBP2.46□□□□□ -2.02
HPS3-205ENST00000478525 PIK3R1P27986 724 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 HLCSP50747 726 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 RHBDL3P58872 404 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 CX3CL1P78423 397 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 PNRC1Q12796 327 aaPredicted RBP2.46□□□□□ -2.02
HPS3-205ENST00000478525 PLA2G7Q13093 441 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 GRAMD1BQ3KR37 738 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 GRTP1Q5TC63 336 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 ABHD12Q8N2K0 398 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 TSPYL6Q8N831 410 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 HJURPQ8NCD3 748 aaPredicted RBP2.46□□□□□ -2.02
HPS3-205ENST00000478525 METTL6Q8TCB7 284 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 PERPQ96FX8 193 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 SLC45A3Q96JT2 553 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 C1orf147Q96MC9 270 aaPredicted RBP2.46□□□□□ -2.02
HPS3-205ENST00000478525 NUDCD1Q96RS6 583 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 FNBP1Q96RU3 617 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 DDOQ99489 341 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 ZNF577Q9BSK1 485 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 C1QTNF1Q9BXJ1 281 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 VN1R1Q9GZP7 353 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 ARRDC1-AS1Q9H2J1 176 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 TAS2R10Q9NYW0 307 aa2.46□□□□□ -2.02
HPS3-205ENST00000478525 ZNF107Q9UII5 783 aaPredicted RBP2.46□□□□□ -2.02
HPS3-205ENST00000478525 CCDC196A0A1B0GTZ2 297 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 A0A1W2PR80 420 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 PLEKHD1A6NEE1 506 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 PI4K2BG5E9Z4 385 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 ZFP36L2P47974 494 aaKnown RBP2.45□□□□□ -2.02
HPS3-205ENST00000478525 GALCP54803 685 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 DMPKQ09013 629 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 CAPRIN1Q14444 709 aaKnown RBP2.45□□□□□ -2.02
HPS3-205ENST00000478525 KIF6Q6ZMV9 814 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 TYMSOSQ8TAI1 123 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 C11orf45Q8TAV5 145 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 CHPT1Q8WUD6 406 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 ZKSCAN4Q969J2 545 aaPredicted RBP2.45□□□□□ -2.02
HPS3-205ENST00000478525 TOMM40LQ969M1 308 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 PDLIM5Q96HC4 596 aaKnown RBP2.45□□□□□ -2.02
HPS3-205ENST00000478525 AGAP4Q96P64 663 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 ARPC5LQ9BPX5 153 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 HHATLQ9HCP6 504 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 NDE1Q9NXR1 346 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 ANAPC11Q9NYG5 84 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 NYAP2Q9P242 653 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 PPP2R2CQ9Y2T4 447 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 LYVE1Q9Y5Y7 322 aa2.45□□□□□ -2.02
HPS3-205ENST00000478525 A0A087WUV0 522 aaPredicted RBP2.44□□□□□ -2.02
HPS3-205ENST00000478525 GAPDHSO14556 408 aaPredicted RBP2.44□□□□□ -2.02
HPS3-205ENST00000478525 LDHAP00338 332 aaKnown RBP2.44□□□□□ -2.02
HPS3-205ENST00000478525 UBL4AP11441 157 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 PPP2R2BQ00005 443 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 POU5F1Q01860 360 aaKnown RBP2.44□□□□□ -2.02
HPS3-205ENST00000478525 EIPR1Q53HC9 387 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 SLC25A53Q5H9E4 307 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 ACSM2BQ68CK6 577 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 GLDNQ6ZMI3 551 aaPredicted RBP2.44□□□□□ -2.02
HPS3-205ENST00000478525 SLC25A42Q86VD7 318 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 CATSPERDQ86XM0 798 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 ARMC8Q8IUR7 673 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 NUP37Q8NFH4 326 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 TBC1D16Q8TBP0 767 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 RNF128Q8TEB7 428 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 ATP8B4Q8TF62 1192 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 MTERF3Q96E29 417 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 CNOT6LQ96LI5 555 aaKnown RBP2.44□□□□□ -2.02
HPS3-205ENST00000478525 MAN2C1Q9NTJ4 1040 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 B4GALT7Q9UBV7 327 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 ARHGAP26Q9UNA1 814 aa2.44□□□□□ -2.02
HPS3-205ENST00000478525 GPRIN2O60269 458 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 THEGLP0DJG4 465 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 IGHV4-31P0DP07 118 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 NMBRP28336 390 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 HERV-K104P61576 105 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 SNRPEP62304 92 aaKnown RBP2.43□□□□□ -2.02
HPS3-205ENST00000478525 GUCY2DQ02846 1103 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 CD300CQ08708 224 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 EIF4EBP2Q13542 120 aaPredicted RBP2.43□□□□□ -2.02
HPS3-205ENST00000478525 SQLEQ14534 574 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 LYSMD4Q5XG99 296 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 SLC25A47Q6Q0C1 308 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 CEACAM19Q7Z692 300 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 GPD1LQ8N335 351 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 SUMF1Q8NBK3 374 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 OR6S1Q8NH40 331 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 KCNG4Q8TDN1 519 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 ELMOD3Q96FG2 381 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 FAM81BQ96LP2 452 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 GAD1Q99259 594 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 AGXT2Q9BYV1 514 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 PAIP1Q9H074 479 aaKnown RBP2.43□□□□□ -2.02
HPS3-205ENST00000478525 MED20Q9H944 212 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 SETD4Q9NVD3 440 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 CTSZQ9UBR2 303 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 POMT2Q9UKY4 750 aa2.43□□□□□ -2.02
HPS3-205ENST00000478525 PNMA2Q9UL42 364 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms