RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLC1A5Q15758 541 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC14A2Q15849 920 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF789Q5FWF6 425 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 AGAP7PQ5VUJ5 663 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC9A4Q6AI14 798 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SP5Q6BEB4 398 aaPredicted RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SARM1Q6SZW1 724 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 KDELC1Q6UW63 502 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SPOCD1Q6ZMY3 1216 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SHISA6Q6ZSJ9 500 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 BZW1Q7L1Q6 419 aaKnown RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 PID1Q7Z2X4 250 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 PPP1R32Q7Z5V6 425 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 KCNMB4Q86W47 210 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 AMIGO1Q86WK6 493 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 CCDC50Q8IVM0 306 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 PARP9Q8IXQ6 854 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 C19orf47Q8N9M1 422 aaKnown RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 OR4K2Q8NGD2 314 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 OR2Y1Q8NGV0 311 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 GRHL3Q8TE85 626 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ZFPM2Q8WW38 1151 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 PTERQ96BW5 349 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 MRGPRX2Q96LB1 330 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 TEKT5Q96M29 485 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 AGAP4Q96P64 663 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 OLFM3Q96PB7 478 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 GBP4Q96PP9 640 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 APOL2Q9BQE5 337 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 CCM2Q9BSQ5 444 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 FICDQ9BVA6 458 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SPRTNQ9H040 489 aaPredicted RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 EPS8L2Q9H6S3 715 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SMOXQ9NWM0 555 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ACTR10Q9NZ32 417 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SAE1Q9UBE0 346 aaPredicted RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 COPG2Q9UBF2 871 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 LCMT1Q9UIC8 334 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SH3BGRL2Q9UJC5 107 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 FBXL4Q9UKA2 621 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ENTPD4Q9Y227 616 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 HYOU1Q9Y4L1 999 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 AP1M2Q9Y6Q5 423 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 A0A1B0GUH1 482 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 LOC285095A0A1B0GVY8 99 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 A0A1W2PQJ5 194 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 MACROD2A1Z1Q3 448 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 KLHL33A6NCF5 533 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ISM1B1AKI9 464 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 AGPSO00116 658 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 CCL22O00626 93 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ZSCAN9O15535 394 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 SPOPO43791 374 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 CST8O60676 142 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 KLF7O75840 302 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 AGTP01019 485 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 CD63P08962 238 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 PYGMP11217 842 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 EDN3P14138 238 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 PECAM1P16284 738 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 UGT2B7P16662 529 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ITGALP20701 1170 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 GRNP28799 593 aaKnown RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 CD68P34810 354 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 PRLHRP49683 370 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ZBED6P86452 979 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 AIMP2Q13155 320 aaKnown RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 MPP3Q13368 585 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF169Q14929 603 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 NR1I3Q14994 352 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 PRKD1Q15139 912 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ZXDCQ2QGD7 858 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 NKAIN1Q4KMZ8 207 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 BCL7AQ4VC05 210 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 FIGNQ5HY92 759 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 CCDC181Q5TID7 509 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 SPESP1Q6UW49 350 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 IGFL3Q6UXB1 125 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 LINC00696Q6ZRV3 163 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 Q6ZS92 163 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 TAS2R42Q7RTR8 314 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF567Q8N184 647 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 NXPE1Q8N323 547 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 METTL27Q8N6F8 245 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 PPP4R1Q8TF05 950 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 SYN2Q92777 582 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 P3H4Q92791 437 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 TADA1Q96BN2 335 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 ULK4Q96C45 1275 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 OXNAD1Q96HP4 312 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 THOC3Q96J01 351 aaKnown RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 COPS8Q99627 209 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 AP1M1Q9BXS5 423 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 SOX17Q9H6I2 414 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 COG4Q9H9E3 785 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 VPS37BQ9H9H4 285 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 FAM60AQ9NP50 221 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC6A20Q9NP91 592 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms