RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ITGA3P26006 1051 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 HADHAP40939 763 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 FOLR3P41439 243 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 GCGRP47871 477 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 CDKN1CP49918 316 aaPredicted RBP9.42□□□□□ -0.9
COL4A5-204ENST00000477429 XIAPP98170 497 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 ADCY2Q08462 1091 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 PRKG2Q13237 762 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 PDK2Q15119 407 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 PPP2R5EQ16537 467 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 LDLRAP1Q5SW96 308 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 SLC9A4Q6AI14 798 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 ARMC6Q6NXE6 501 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 SHISA6Q6ZSJ9 500 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 CFAP206Q8IYR0 622 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 CARFQ8N187 725 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 ZNF655Q8N720 491 aaPredicted RBP9.42□□□□□ -0.9
COL4A5-204ENST00000477429 CLEC1AQ8NC01 280 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 OR2Y1Q8NGV0 311 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 DNAJB14Q8TBM8 379 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 BRSK1Q8TDC3 778 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 BLOC1S5Q8TDH9 187 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 LCN9Q8WX39 176 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 OR52A5Q9H2C5 316 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 SRMSQ9H3Y6 488 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 FAM96AQ9H5X1 160 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 SMOXQ9NWM0 555 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 COPG2Q9UBF2 871 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 SERTAD3Q9UJW9 196 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 ICKQ9UPZ9 632 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 KLHL20Q9Y2M5 609 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 ARL5AQ9Y689 179 aa9.42□□□□□ -0.9
COL4A5-204ENST00000477429 DNMT3AQ9Y6K1 912 aaPredicted RBP9.42□□□□□ -0.9
COL4A5-204ENST00000477429 PCM1Q15154 2024 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 CCDC66A2RUB6 948 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 C9J4A7 227 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 MYO1FO00160 1098 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 MED26O95402 600 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ALPPP05187 535 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 SLC35G4P0C7Q5 338 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 PECAM1P16284 738 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-204ENST00000477429 PEBP1P30086 187 aaKnown RBP9.41□□□□□ -0.9
COL4A5-204ENST00000477429 TSFMP43897 325 aaKnown RBP9.41□□□□□ -0.9
COL4A5-204ENST00000477429 DYNLT1P63172 113 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 CDC16Q13042 620 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ZNF169Q14929 603 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-204ENST00000477429 HADHQ16836 314 aaKnown RBP9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ZXDCQ2QGD7 858 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-204ENST00000477429 NKAIN1Q4KMZ8 207 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 BCL7AQ4VC05 210 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 TEX44Q53QW1 395 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 RHBDD2Q6NTF9 364 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 KIRREL2Q6UWL6 708 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 COX15Q7KZN9 410 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ACVR1CQ8NER5 493 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ZNF398Q8TD17 642 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 DTX3LQ8TDB6 740 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 PPP4R1Q8TF05 950 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 RELTQ969Z4 430 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 CNDP1Q96KN2 507 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 TEKT5Q96M29 485 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 FER1L6-AS2Q96M78 137 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 OR2A14Q96R47 310 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 FERD3LQ96RJ6 166 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 HGH1Q9BTY7 390 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 DHRS4Q9BTZ2 278 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 C10orf88Q9H8K7 445 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 FANCEQ9HB96 536 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ATP13A2Q9NQ11 1180 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 AGPAT4Q9NRZ5 378 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ACTR10Q9NZ32 417 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 HS3ST3B1Q9Y662 390 aa9.41□□□□□ -0.9
COL4A5-204ENST00000477429 ANKRD12Q6UB98 2062 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 A0A0A6YYK5 440 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 A0A1W2PQJ5 194 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 LRRD1A4D1F6 860 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 AGPSO00116 658 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PEX12O00623 359 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 JRKO75564 520 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 OR2B3O76000 313 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PRAMEF1O95521 474 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 AGTP01019 485 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 UGT2B7P16662 529 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 MSH3P20585 1137 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 AGXTP21549 392 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 MST1P26927 711 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 AKT1P31749 480 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 DCDP81605 110 aaKnown RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PRKAA1Q13131 559 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 MSLNQ13421 630 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PRKD1Q15139 912 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 SLC1A5Q15758 541 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 SLC14A2Q15849 920 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PRAMEF13Q5VWM6 474 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 SPESP1Q6UW49 350 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 LINC00696Q6ZRV3 163 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 NCCRP1Q6ZVX7 275 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 DNAJC22Q8N4W6 341 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms