RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 F8W8V4 182 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 TM9SF1O15321 606 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 YY2O15391 372 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 TAPBPO15533 448 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 DLX3O60479 287 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 KCNJ13O60928 360 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 KERAO60938 352 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 CFIP05156 583 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 GNSP15586 552 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 IDSP22304 550 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 ALDH3A1P30838 453 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 ARRB2P32121 409 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 HOXD12P35452 270 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 MPLP40238 635 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 RXRGP48443 463 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 SERPINB4P48594 390 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 CCT5P48643 541 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 SLC18A1P54219 525 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 RPE65Q16518 533 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 DUOXA1Q1HG43 343 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 UAP1L1Q3KQV9 507 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 TRIM61Q5EBN2 209 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 SLC23A3Q6PIS1 610 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 ABRAXAS1Q6UWZ7 409 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 UBE2R2Q712K3 238 aaPredicted RBP9.05□□□□□ -0.96
PGK1-204ENST00000477335 TAF8Q7Z7C8 310 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 LCA5Q86VQ0 697 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 C10orf107Q8IVU9 208 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 SLC25A45Q8N413 288 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 RHEBL1Q8TAI7 183 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 SKA2Q8WVK7 121 aaPredicted RBP9.05□□□□□ -0.96
PGK1-204ENST00000477335 JPH3Q8WXH2 748 aaPredicted RBP9.05□□□□□ -0.96
PGK1-204ENST00000477335 ZDHHC16Q969W1 377 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 C12orf66Q96MD2 445 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 PKP4Q99569 1192 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 ELF4Q99607 663 aaPredicted RBP9.05□□□□□ -0.96
PGK1-204ENST00000477335 MRPL57Q9BQC6 102 aaKnown RBP9.05□□□□□ -0.96
PGK1-204ENST00000477335 TMEM79Q9BSE2 394 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 MENTQ9BUN1 341 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 SLC12A9Q9BXP2 914 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 MRPL46Q9H2W6 279 aaKnown RBP9.05□□□□□ -0.96
PGK1-204ENST00000477335 ERVMER34-1Q9H9K5 563 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 UTP6Q9NYH9 597 aaKnown RBP9.05□□□□□ -0.96
PGK1-204ENST00000477335 COPG2Q9UBF2 871 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 SUSD2Q9UGT4 822 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 PCOLCE2Q9UKZ9 415 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 ACSL5Q9ULC5 683 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 RNF112Q9ULX5 631 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 OARD1Q9Y530 152 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 KNL1Q8NG31 2342 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 VPS13AQ96RL7 3174 aa9.05□□□□□ -0.96
PGK1-204ENST00000477335 A0A1B0GTQ1 180 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 WDR91A4D1P6 747 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 KLHL33A6NCF5 533 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 NCF1BA6NI72 391 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 PDZK1P1A8MUH7 402 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 NCF1CA8MVU1 366 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 FFAR2O15552 330 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 AQP9O43315 295 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 KLK8O60259 260 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 NOBOXO60393 691 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 ZWINTO95229 277 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 SIX3O95343 332 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 GUCA1CO95843 209 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 C8GP07360 202 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 BPGMP07738 259 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 RBP1P09455 135 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 SLC35G4P0C7Q5 338 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 MTHFD1P11586 935 aaKnown RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 NCF1P14598 390 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 CPA3P15088 417 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 VCLP18206 1134 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 EPHA8P29322 1005 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 SLC19A1P41440 591 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 CCR10P46092 362 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 AGTR2P50052 363 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 MAZP56270 477 aaKnown RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 HNRNPKP61978 463 aaKnown RBP eCLIP9.04□□□□□ -0.96
PGK1-204ENST00000477335 UBE2IP63279 158 aaKnown RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 PLOD1Q02809 727 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 ILF3Q12906 894 aaKnown RBP eCLIP9.04□□□□□ -0.964e-6■■■■□ 25.9
PGK1-204ENST00000477335 GPS2Q13227 327 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 TGFBIQ15582 683 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 DEFB133Q30KQ1 61 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 HLA-BQ31612 363 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 CCDC153Q494R4 210 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 TTC19Q6DKK2 380 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 IYDQ6PHW0 289 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 WASH2PQ6VEQ5 465 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 ZCCHC23Q6ZST2 131 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 RPS27LQ71UM5 84 aaKnown RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 ADAMTSL2Q86TH1 951 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 GATAD2AQ86YP4 633 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 CNPY4Q8N129 248 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 NAGSQ8N159 534 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 OR6Y1Q8NGX8 325 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 FAM76AQ8TAV0 307 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 STAG3L4Q8TBR4 150 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 TFGQ92734 400 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms