RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SYVN1Q86TM6 617 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 PIM3Q86V86 326 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 CALHM3Q86XJ0 350 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 DDIASQ8IXT1 998 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 RNF168Q8IYW5 571 aaPredicted RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 SFRP1Q8N474 314 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 NKAPQ8N5F7 415 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 ZBTB8BQ8NAP8 495 aaPredicted RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 OR2T11Q8NH01 316 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 SCAMP5Q8TAC9 235 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 SNX19Q92543 992 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 HSPBAP1Q96EW2 488 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 HMCESQ96FZ2 354 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 PLEKHA8Q96JA3 519 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 COX4I2Q96KJ9 171 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 TBATAQ96M53 351 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 ZNF583Q96ND8 569 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 NSUN5Q96P11 429 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 CSF3RQ99062 836 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 PSD2Q9BQI7 771 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 NEURL2Q9BR09 285 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 OSBPL10Q9BXB5 764 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 FSD1LQ9BXM9 530 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 ZYG11BQ9C0D3 744 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 TNKS2Q9H2K2 1166 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 IRAK4Q9NWZ3 460 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MAGEL2Q9UJ55 1249 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 SH3GLB1Q9Y371 365 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 HEMK1Q9Y5R4 338 aaPredicted RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 COMMD10Q9Y6G5 202 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 KIAA1671Q9BY89 1806 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 BDP1A6H8Y1 2624 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MYO9BQ13459 2157 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ATP6AP2A0A1C7CYW4 349 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 A0A1W2PPW3 197 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 LRRC14BA6NHZ5 514 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 SAC3D1A6NKF1 404 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 TMX2-CTNND1H3BSU7 103 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 NR5A2O00482 541 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ANGPT2O15123 496 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 TBC1D4O60343 1298 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 DPM1O60762 260 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 KATNA1O75449 491 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ECI2O75521 394 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 SLC22A3O75751 556 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ATP6AP2O75787 350 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 CNTN5O94779 1100 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 SIX3O95343 332 aaPredicted RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 SNAP29O95721 258 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 NDST3O95803 873 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 CCDC159P0C7I6 412 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 RAP2AP10114 183 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 HGFP14210 728 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 CHRM3P20309 590 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MSH3P20585 1137 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 SAT1P21673 171 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MATN1P21941 496 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 FGFR3P22607 806 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 RPL10P27635 214 aaKnown RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 HOXD9P28356 352 aaPredicted RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 SHMT2P34897 504 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 CD86P42081 329 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 PLK1P53350 603 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 LIMK1P53667 647 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ATXN3P54252 364 aaPredicted RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 CDH13P55290 713 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 OR4D2P58180 307 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 CXCR4P61073 352 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 RPS3AP61247 264 aaKnown RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 ISL1P61371 349 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 DSC2Q02487 901 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 RELAQ04206 551 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 EPS8Q12929 822 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 IL18R1Q13478 541 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 OXA1LQ15070 435 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 DPY19L1Q2PZI1 675 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ANKDD1AQ495B1 522 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ALFQ53S48 1182 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 RABL3Q5HYI8 236 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 FGD3Q5JSP0 725 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 FAM219BQ5XKK7 198 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 SLC16A12Q6ZSM3 486 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 KCTD8Q6ZWB6 473 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ANKRD13BQ86YJ7 626 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ETFBKMTQ8IXQ9 262 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ZNF786Q8N393 782 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 CPA6Q8N4T0 437 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 DTWD1Q8N5C7 304 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 PIK3C3Q8NEB9 887 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 OR4L1Q8NH43 312 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 HASPINQ8TF76 798 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 RAB2BQ8WUD1 216 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 SMG7Q92540 1137 aaKnown RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 HPS1Q92902 700 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 IGSF8Q969P0 613 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MUL1Q969V5 352 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 RHBDF1Q96CC6 855 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ASIC4Q96FT7 647 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 FBXL20Q96IG2 436 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MAGED4Q96JG8 741 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms