RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CA5AP35218 305 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 TMPRSS3P57727 454 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 UBE2IP63279 158 aaKnown RBP15.3■□□□□ 0.04
CPSF3-203ENST00000475482 TMPRSS15P98073 1019 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 HHEXQ03014 270 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 ATMQ13315 3056 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 KIR2DS5Q14953 304 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 RNF187Q5TA31 235 aaPredicted RBP15.3■□□□□ 0.04
CPSF3-203ENST00000475482 NKAIN2Q5VXU1 208 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 TMEM71Q6P5X7 295 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 ABRAXAS1Q6UWZ7 409 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 WASH2PQ6VEQ5 465 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 OR13C4Q8NGS5 318 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 CABS1Q96KC9 395 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 UBL7Q96S82 380 aaPredicted RBP15.3■□□□□ 0.04
CPSF3-203ENST00000475482 SELENOSQ9BQE4 189 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 TIMM29Q9BSF4 260 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 WASH6PQ9NQA3 447 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 KLC4Q9NSK0 619 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 SMOXQ9NWM0 555 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 KCNK4Q9NYG8 393 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 NKIRAS1Q9NYS0 192 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 IL1RAPL1Q9NZN1 696 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 PISDQ9UG56 409 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 KCTD3Q9Y597 815 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 SLC30A1Q9Y6M5 507 aa15.3■□□□□ 0.04
CPSF3-203ENST00000475482 TRBV23OR9-2A0A075B6M9 112 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 CCDC162PA2VCL2 907 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 C9orf172C9J069 976 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 KMOO15229 486 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 MTX2O75431 263 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 CDK14O94921 469 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 GOT2P00505 430 aaKnown RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 JMJD7P0C870 316 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 XRCC1P18887 633 aaPredicted RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 KRT4P19013 534 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SPAM1P38567 509 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SLC1A2P43004 574 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 LEPRP48357 1165 aaKnown RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 CD151P48509 253 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SERPINB8P50452 374 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SLC18A1P54219 525 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 EPHA4P54764 986 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 TMEM115Q12893 351 aaPredicted RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 BIRC2Q13490 618 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 PHF19Q5T6S3 580 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 MROH9Q5TGP6 573 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 BROXQ5VW32 411 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 LYPLAL1Q5VWZ2 237 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 WDR74Q6RFH5 385 aaPredicted RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SLC9B2Q86UD5 537 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 LRRTM4Q86VH4 590 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 CILP2Q8IUL8 1156 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 AVL9Q8NBF6 648 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 LSM14AQ8ND56 463 aaKnown RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 DDHD1Q8NEL9 900 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 MZB1Q8WU39 189 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SH3KBP1Q96B97 665 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 CCDC74BQ96LY2 380 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SLC38A3Q99624 504 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 IQCGQ9H095 443 aaKnown RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 UCK1Q9HA47 277 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 KCNK9Q9NPC2 374 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 PRDM8Q9NQV8 689 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 INTS10Q9NVR2 710 aaKnown RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 TMEM9Q9P0T7 183 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 SCHIP1Q9P0W5 487 aaPredicted RBP15.29■□□□□ 0.04
CPSF3-203ENST00000475482 CPNE7Q9UBL6 633 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 PSAT1Q9Y617 370 aa15.29■□□□□ 0.04
CPSF3-203ENST00000475482 COL6A6A6NMZ7 2263 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 LILRA5A6NI73 299 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 AGAP14A8MT82 685 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 GOLGA8TH3BQL2 631 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 K7ENP7 123 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 PRPF4O43172 522 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 BUD23O43709 281 aaKnown RBP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A9O60656 530 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 KCNJ13O60928 360 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 FGF3P11487 239 aaPredicted RBP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 CCL4P13236 92 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 TTPAP49638 278 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 ARSDP51689 593 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 SLC12A2P55011 1212 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 CXADRP78310 365 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 CHRNA6Q15825 494 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 AGAP9Q5VTM2 703 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 INO80CQ6PI98 192 aaPredicted RBP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 CRTC3Q6UUV7 619 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 PCSK4Q6UW60 755 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 CERS6Q6ZMG9 384 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 ARHGAP22Q7Z5H3 698 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 ZC3HC1Q86WB0 502 aaKnown RBP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 ZNF761Q86XN6 746 aaPredicted RBP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 DTX1Q86Y01 620 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 RCBTB1Q8NDN9 531 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 OR10G6Q8NH81 332 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 USP7Q93009 1102 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 TSPAN17Q96FV3 270 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms