RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 FSTL5Q8N475 847 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF473Q8WTR7 871 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SETD7Q8WTS6 366 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 BCL2L2Q92843 193 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF578Q96N58 590 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF577Q9BSK1 485 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 NLNQ9BYT8 704 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 DPEP3Q9H4B8 488 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 RGCCQ9H4X1 137 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 AGO3Q9H9G7 860 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SMURF1Q9HCE7 757 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 PRDM8Q9NQV8 689 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 TUBG2Q9NRH3 451 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 RMND1Q9NWS8 449 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 SUSD2Q9UGT4 822 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 ADAM28Q9UKQ2 775 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 FZD10Q9ULW2 581 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 DYRK1BQ9Y463 629 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 HELTA6NFD8 242 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 NPIPA2E9PIF3 369 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TGFBR3LH3BV60 316 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TRIM77I1YAP6 450 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 FCHO1O14526 889 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CHMP2AO43633 222 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 WBP4O75554 376 aaKnown RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 NDST3O95803 873 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CRYABP02511 175 aaKnown RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 PROCP04070 461 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 AREGP15514 252 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 NCF2P19878 526 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 MX1P20591 662 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CCNOP22674 350 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 G0S2P27469 103 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SERPINB1P30740 379 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 NRIP1P48552 1158 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF135P52742 658 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 PLK1P53350 603 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CEBPGP53567 150 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 GUCY1A3Q02108 690 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 PRKAA1Q13131 559 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 AIMP2Q13155 320 aaKnown RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 OLIG2Q13516 323 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 NFYCQ13952 458 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC5A12Q1EHB4 618 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CCDC157Q569K6 752 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 BEX5Q5H9J7 111 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SPANXN2Q5MJ10 180 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 EOGTQ5NDL2 527 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TCHHL1Q5QJ38 904 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SLFN12LQ6IEE8 588 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF530Q6P9A1 599 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TSSK4Q6SA08 328 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CRTC3Q6UUV7 619 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 LRRC8DQ7L1W4 858 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TRAPPC11Q7Z392 1133 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 LINC00523Q86TU6 105 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SERINC5Q86VE9 423 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TRIM69Q86WT6 500 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 HIPK1Q86Z02 1210 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 KLHL7Q8IXQ5 586 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC15A4Q8N697 577 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TTC29Q8NA56 475 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 DAGLBQ8NCG7 672 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 DDHD1Q8NEL9 900 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 OR6Q1Q8NGQ2 317 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SCAMP5Q8TAC9 235 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 P3H4Q92791 437 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 NTAN1Q96AB6 310 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 EEF2KMTQ96G04 330 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 C5orf30Q96GV9 206 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 NECTIN4Q96NY8 510 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 FOXN4Q96NZ1 517 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC9A7Q96T83 725 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 BPIFA3Q9BQP9 254 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 MXRA8Q9BRK3 442 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 TMEM175Q9BSA9 504 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 FUZQ9BT04 418 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF416Q9BWM5 594 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 RACGAP1Q9H0H5 632 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 RAB17Q9H0T7 212 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CDT1Q9H211 546 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 SAV1Q9H4B6 383 aaPredicted RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CNNM1Q9NRU3 951 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 PNO1Q9NRX1 252 aaKnown RBP5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 GID8Q9NWU2 228 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CMTM6Q9NX76 183 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 MPP6Q9NZW5 540 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 POLLQ9UGP5 575 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 CSADQ9Y600 493 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 MAP3K15Q6ZN16 1313 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 ITPR3Q14573 2671 aa5.97□□□□□ -1.45
SMARCE1-208ENST00000474246 MN1Q10571 1320 aaPredicted RBP5.96□□□□□ -1.45
SMARCE1-208ENST00000474246 UBN2Q6ZU65 1347 aa5.96□□□□□ -1.45
SMARCE1-208ENST00000474246 STK36Q9NRP7 1315 aa5.96□□□□□ -1.45
SMARCE1-208ENST00000474246 CFAP73A6NFT4 308 aa5.96□□□□□ -1.45
SMARCE1-208ENST00000474246 LIPT2A6NK58 231 aa5.96□□□□□ -1.45
SMARCE1-208ENST00000474246 E5RI56 91 aa5.96□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF185O15231 689 aa5.96□□□□□ -1.45
SMARCE1-208ENST00000474246 SEPT4O43236 478 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms