RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 KRT33BQ14525 404 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 ZC3H18Q86VM9 953 aaKnown RBP12.18□□□□□ -0.46
TRAF4-209ENST00000473421 MCEMP1Q8IX19 187 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 ZADH2Q8N4Q0 377 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 ZNF655Q8N720 491 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-209ENST00000473421 CLEC1AQ8NC01 280 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 CATSPER1Q8NEC5 780 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 OR2Y1Q8NGV0 311 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 SLC35G2Q8TBE7 412 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-209ENST00000473421 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
TRAF4-209ENST00000473421 FER1L6-AS2Q96M78 137 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 OR2A14Q96R47 310 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 HGH1Q9BTY7 390 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 SLC7A5P2Q9GIP4 190 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 ASB8Q9H765 288 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 SLC6A20Q9NP91 592 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 UVRAGQ9P2Y5 699 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 CAPN11Q9UMQ6 739 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 KLHL20Q9Y2M5 609 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 PKP3Q9Y446 797 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 COLEC10Q9Y6Z7 277 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
TRAF4-209ENST00000473421 NUP210LQ5VU65 1888 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 AGAP14A8MT82 685 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 STX7O15400 261 aaKnown RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 OR2B3O76000 313 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 WISP2O76076 250 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 SERPINC1P01008 464 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 H2AFZP0C0S5 128 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 UGT2B7P16662 529 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 AGXTP21549 392 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 HADHAP40939 763 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 FOLR3P41439 243 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 CDKN2BP42772 138 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 PRLHRP49683 370 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 Q0VFX4 171 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 ASTE1Q2TB18 679 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 NKAIN1Q4KMZ8 207 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 KAZNQ674X7 775 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 RHBDD2Q6NTF9 364 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 SPESP1Q6UW49 350 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 NAPRTQ6XQN6 538 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 UNC5AQ6ZN44 842 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 SHISA6Q6ZSJ9 500 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 H2AFVQ71UI9 128 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 FJX1Q86VR8 437 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 AMIGO1Q86WK6 493 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 SLC34A3Q8N130 599 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 C19orf47Q8N9M1 422 aaKnown RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 HAUS1Q96CS2 278 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 FCRL5Q96RD9 977 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 SRPK1Q96SB4 655 aaKnown RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 WDR77Q9BQA1 342 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 DPH2Q9BQC3 489 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 DHRS4Q9BTZ2 278 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 FICDQ9BVA6 458 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 MAK16Q9BXY0 300 aaKnown RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 TFB2MQ9H5Q4 396 aaKnown RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 IFT80Q9P2H3 777 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-209ENST00000473421 FBXL4Q9UKA2 621 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 PADI2Q9Y2J8 665 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 HIVEP1P15822 2718 aa12.17□□□□□ -0.46
TRAF4-209ENST00000473421 PRSS44E7EML9 344 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 PEX12O00623 359 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 SOCS6O14544 535 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 CST8O60676 142 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 ALPPP05187 535 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 ITGA3P26006 1051 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 NDUFS1P28331 727 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 PEBP1P30086 187 aaKnown RBP12.16□□□□□ -0.46
TRAF4-209ENST00000473421 GCGRP47871 477 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 KCNK10P57789 538 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 DCDP81605 110 aaKnown RBP12.16□□□□□ -0.46
TRAF4-209ENST00000473421 FANCCQ00597 558 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 BOP1Q14137 746 aaKnown RBP12.16□□□□□ -0.46
TRAF4-209ENST00000473421 TAZQ16635 292 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 ZDHHC20Q5W0Z9 365 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 IGFL2Q6UWQ7 119 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 PARP9Q8IXQ6 854 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 DNAJC22Q8N4W6 341 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 CLDN19Q8N6F1 224 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 OR5AR1Q8NGP9 310 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 HM13Q8TCT9 377 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
TRAF4-209ENST00000473421 FAR1Q8WVX9 515 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 PTERQ96BW5 349 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 GOLPH3Q9H4A6 298 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 SYTL2Q9HCH5 934 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRAF4-209ENST00000473421 HACD3Q9P035 362 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 KLHL8Q9P2G9 620 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-209ENST00000473421 PLAGL1Q9UM63 463 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 TACC2O95359 2948 aa12.16□□□□□ -0.46
TRAF4-209ENST00000473421 PKDREJQ9NTG1 2253 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms