RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SSTR1P30872 391 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 CCKBRP32239 447 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 HALP42357 657 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 MAPK9P45984 424 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 LEPRP48357 1165 aaKnown RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 CD151P48509 253 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 CARSP49589 748 aaKnown RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 CLCN7P51798 805 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 LIMK2P53671 638 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 GPX6P59796 221 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 GPLD1P80108 840 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 GSTM4Q03013 218 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 RPA4Q13156 261 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 BIRC2Q13490 618 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 THOC5Q13769 683 aaKnown RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 BROXQ5VW32 411 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 PTRHD1Q6GMV3 140 aaKnown RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 ZBED8Q8IZ13 594 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 SLC22A15Q8IZD6 547 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 LMNTD1Q8N9Z9 388 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 ACVR1CQ8NER5 493 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 OR5AR1Q8NGP9 310 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 IFT81Q8WYA0 676 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 LRRC39Q96DD0 335 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 CCDC74BQ96LY2 380 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 TTC1Q99614 292 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 NAT9Q9BTE0 207 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 VPS37BQ9H9H4 285 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 SAYSD1Q9NPB0 183 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 INTS10Q9NVR2 710 aaKnown RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 SLC24A2Q9UI40 661 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 GNPTGQ9UJJ9 305 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 SATB2Q9UPW6 733 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 RUVBL2Q9Y230 463 aaKnown RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 PSAT1Q9Y617 370 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 NAV2Q8IVL1 2488 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 MYO18BQ8IUG5 2567 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 COL6A6A6NMZ7 2263 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 CXorf49A8MYA2 514 aaPredicted RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 QSOX1O00391 747 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 CTIFO43310 598 aaKnown RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 KIF1CO43896 1103 aaKnown RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 BRINP1O60477 761 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 C9P02748 559 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 ESR1P03372 595 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 PPARGP37231 505 aaPredicted RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 ETV5P41161 510 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 INHBCP55103 352 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 PCBP4P57723 403 aaKnown RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 TMPRSS3P57727 454 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 ERVPABLB-1P60509 514 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 HSPA14Q0VDF9 509 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 PRKG2Q13237 762 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 FRG1Q14331 258 aaKnown RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 GRB7Q14451 532 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 SLMAPQ14BN4 828 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 ERCC6LQ2NKX8 1250 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 RBM20Q5T481 1227 aaKnown RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 RNF187Q5TA31 235 aaPredicted RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 TMEM71Q6P5X7 295 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 WDR74Q6RFH5 385 aaPredicted RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 CAPN12Q6ZSI9 719 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 PIM3Q86V86 326 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 LRRC6Q86X45 466 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 CNPY4Q8N129 248 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 OR4D9Q8NGE8 314 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 SNRNP27Q8WVK2 155 aaKnown RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 NCSTNQ92542 709 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 TFGQ92734 400 aaPredicted RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 PMEPA1Q969W9 287 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 SH3KBP1Q96B97 665 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 LIN37Q96GY3 246 aaPredicted RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 PPM1MQ96MI6 270 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 FERD3LQ96RJ6 166 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 MCMBPQ9BTE3 642 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 MENTQ9BUN1 341 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 KIR3DX1Q9H7L2 352 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 LATS2Q9NRM7 1088 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 ARGLU1Q9NWB6 273 aaPredicted RBP12.76□□□□□ -0.37
TPM3-216ENST00000473036 NFS1Q9Y697 457 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 SPTA1P02549 2419 aa12.76□□□□□ -0.37
TPM3-216ENST00000473036 BTN3A3O00478 584 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 DUX1O43812 170 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 CCL4P13236 92 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 ITIH1P19827 911 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 CAPZBP47756 277 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 CDKN2DP55273 166 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 MN1Q10571 1320 aaPredicted RBP12.75□□□□□ -0.37
TPM3-216ENST00000473036 ABRQ12979 859 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 CLPPQ16740 277 aaPredicted RBP12.75□□□□□ -0.37
TPM3-216ENST00000473036 CCSMST1Q4G0I0 132 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 ACSBG2Q5FVE4 666 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 C3orf38Q5JPI3 329 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 PHF19Q5T6S3 580 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 ARHGAP22Q7Z5H3 698 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 RBM12BQ8IXT5 1001 aaKnown RBP12.75□□□□□ -0.37
TPM3-216ENST00000473036 LMNTD2Q8IXW0 634 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 SIDT2Q8NBJ9 832 aaKnown RBP12.75□□□□□ -0.37
TPM3-216ENST00000473036 OR52E1Q8NGJ3 308 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms