RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 GPATCH11Q8N954 259 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 PHC3Q8NDX5 983 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 CD200R1Q8TD46 325 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 SKA2Q8WVK7 121 aaPredicted RBP14.71□□□□□ -0.05
SNX13-205ENST00000471744 LCN9Q8WX39 176 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 ZDHHC12Q96GR4 267 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 GPR21Q99679 349 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 HGH1Q9BTY7 390 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 RHOJQ9H4E5 214 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 PDP2Q9P2J9 529 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 NFU1Q9UMS0 254 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 MED16Q9Y2X0 877 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 PCM1Q15154 2024 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 ACACAQ13085 2346 aa14.71□□□□□ -0.05
SNX13-205ENST00000471744 PRAMEF33A0A0G2JMD5 474 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 TOX3O15405 576 aaPredicted RBP14.7□□□□□ -0.06
SNX13-205ENST00000471744 SLU7O95391 586 aaKnown RBP14.7□□□□□ -0.06
SNX13-205ENST00000471744 C9P02748 559 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 F7P08709 466 aaPredicted RBP14.7□□□□□ -0.06
SNX13-205ENST00000471744 MPC1LP0DKB6 136 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 THRAP10827 490 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 TYRP1P17643 537 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 SPINK2P20155 84 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 SHMT2P34897 504 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 GP5P40197 560 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 ABRQ12979 859 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 PRKAA1Q13131 559 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 CAMK2BQ13554 666 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 PHF19Q5T6S3 580 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 ARMC6Q6NXE6 501 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 CTAGE3PQ8IX95 158 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 SIDT2Q8NBJ9 832 aaKnown RBP14.7□□□□□ -0.06
SNX13-205ENST00000471744 LRRN4CLQ8ND94 238 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 OR52E1Q8NGJ3 308 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 OR5AR1Q8NGP9 310 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 WDR36Q8NI36 951 aaKnown RBP14.7□□□□□ -0.06
SNX13-205ENST00000471744 FBF1Q8TES7 1133 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.7□□□□□ -0.06
SNX13-205ENST00000471744 FAM136AQ96C01 138 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 NXPE2Q96DL1 559 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 CD180Q99467 661 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 NDNQ99608 321 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 CMKLR1Q99788 373 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 RAB11FIP5Q9BXF6 653 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 SRMSQ9H3Y6 488 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 OGFRQ9NZT2 677 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 SLC17A6Q9P2U8 582 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 VWA7Q9Y334 891 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 PSAT1Q9Y617 370 aa14.7□□□□□ -0.06
SNX13-205ENST00000471744 IGHV5-10-1A0A0J9YXX1 117 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 OR5K3A6NET4 321 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 CASC3O15234 703 aaKnown RBP14.69□□□□□ -0.06
SNX13-205ENST00000471744 MATN4O95460 622 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 MLLT3P42568 568 aaPredicted RBP14.69□□□□□ -0.06
SNX13-205ENST00000471744 CFHR1Q03591 330 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 PRKG2Q13237 762 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 PDAP1Q13442 181 aaKnown RBP14.69□□□□□ -0.06
SNX13-205ENST00000471744 KYNUQ16719 465 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 KLHL38Q2WGJ6 581 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 KBTBD12Q3ZCT8 623 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 ACSBG2Q5FVE4 666 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 RBM20Q5T481 1227 aaKnown RBP14.69□□□□□ -0.06
SNX13-205ENST00000471744 HECTD2Q5U5R9 776 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 ZNF574Q6ZN55 896 aaPredicted RBP14.69□□□□□ -0.06
SNX13-205ENST00000471744 TMPRSS9Q7Z410 1059 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 B3GNT8Q7Z7M8 397 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 LSMEM2Q8N112 164 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 CARFQ8N187 725 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 RAB42Q8N4Z0 105 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 CFAP61Q8NHU2 1237 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 GIMAP7Q8NHV1 300 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 RSC1A1Q92681 617 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 RAD51AP1Q96B01 352 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 ATXN7L3BQ96GX2 97 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 VPS39Q96JC1 886 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 CCDC74BQ96LY2 380 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 CYTH2Q99418 400 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 CDC42EP4Q9H3Q1 356 aaKnown RBP14.69□□□□□ -0.06
SNX13-205ENST00000471744 SEMA6CQ9H3T2 930 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 POLR1BQ9H9Y6 1135 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 SMYD2Q9NRG4 433 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 NINJ2Q9NZG7 142 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 OR6C2Q9NZP2 312 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 GALPQ9UBC7 116 aa14.69□□□□□ -0.06
SNX13-205ENST00000471744 TDRKHQ9Y2W6 561 aaKnown RBP14.69□□□□□ -0.06
SNX13-205ENST00000471744 FAM95CA0A1B0GW59 222 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 OR6C74A6NCV1 312 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 CAPN5O15484 640 aaPredicted RBP14.68□□□□□ -0.06
SNX13-205ENST00000471744 CATP04040 527 aaKnown RBP14.68□□□□□ -0.06
SNX13-205ENST00000471744 ANKRD34CP0C6C1 535 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 HOXB3P14651 431 aaPredicted RBP14.68□□□□□ -0.06
SNX13-205ENST00000471744 FDXRP22570 491 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 TNFRSF8P28908 595 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 CSTF2P33240 577 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNX13-205ENST00000471744 SPRP35270 261 aaPredicted RBP14.68□□□□□ -0.06
SNX13-205ENST00000471744 LSSP48449 732 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 SLC12A2P55011 1212 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 POU4F1Q01851 419 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 RTP5Q14D33 572 aa14.68□□□□□ -0.06
SNX13-205ENST00000471744 GRTP1Q5TC63 336 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms