RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 ZNF195O14628 629 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 EPHB6O15197 1021 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 ZSCAN5DPP0CG00 497 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PRG2P13727 222 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 ITIH1P19827 911 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PRKACGP22612 351 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 CA4P22748 312 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 TSFMP43897 325 aaKnown RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 CAMPP49913 170 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 CCR9P51686 369 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 CASP6P55212 293 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 RPS3AP61247 264 aaKnown RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PPP2R2BQ00005 443 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 COX10Q12887 443 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 IKQ13123 557 aaPredicted RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 MOGAT2Q3SYC2 334 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 NCEH1Q6PIU2 408 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 IL27RAQ6UWB1 636 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 LINGO4Q6UY18 593 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 TBC1D1Q86TI0 1168 aaPredicted RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 HEATR4Q86WZ0 1026 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 MCEMP1Q8IX19 187 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 C11orf53Q8IXP5 236 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 POM121L12Q8N7R1 296 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 HJURPQ8NCD3 748 aaPredicted RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 NUP37Q8NFH4 326 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 GPRC5AQ8NFJ5 357 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 OR6S1Q8NH40 331 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 VANGL1Q8TAA9 524 aaPredicted RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 MAPK15Q8TD08 544 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 RNF128Q8TEB7 428 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 ELMOD3Q96FG2 381 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 WDFY2Q96P53 400 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 SLC22A12Q96S37 553 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 GAD1Q99259 594 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 ABHD6Q9BV23 337 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PUS3Q9BZE2 481 aaKnown RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 MIS12Q9H081 205 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PLK3Q9H4B4 646 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 SLA2Q9H6Q3 261 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 MED20Q9H944 212 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 MBNL1Q9NR56 388 aaKnown RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 FGF21Q9NSA1 209 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 TAB2Q9NYJ8 693 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 NPAP1Q9NZP6 1156 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PRO0461Q9UI25 63 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 CMAHPQ9Y471 501 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 RIPK3Q9Y572 518 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PCDHGA5Q9Y5G8 931 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.66□□□□□ -2.144e-6■■■■□ 22
COMMD3-209ENST00000471350 SESN1Q9Y6P5 492 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 ARHGEF40Q8TER5 1519 aa1.66□□□□□ -2.14
COMMD3-209ENST00000471350 ASTN2O75129 1339 aaPredicted RBP1.66□□□□□ -2.14
COMMD3-209ENST00000471350 PRSS51A0A1B0GVH4 220 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 C15orf61A6NNL5 157 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 GAPDHSO14556 408 aaPredicted RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 SSX4O60224 188 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 RNASEH1O60930 286 aaKnown RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 DDX58O95786 925 aaKnown RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 CLEC3BP05452 202 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 GPIP06744 558 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 NMBRP28336 390 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 RBMS1P29558 406 aaKnown RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 PPARGP37231 505 aaPredicted RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 NKX2-1P43699 371 aaPredicted RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 RPL21P46778 160 aaKnown RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 TUBP50607 506 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 PAX8Q06710 450 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 CRYMQ14894 314 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 MED22Q15528 200 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 PDLIM3Q53GG5 364 aaPredicted RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 INTS11Q5TA45 600 aaKnown RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 LCN1P1Q5VSP4 162 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 GKAP1Q5VSY0 366 aaPredicted RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 NOTUMQ6P988 496 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 COMMD2Q86X83 199 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 CDK20Q8IZL9 346 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 KIRREL3Q8IZU9 778 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 ZNF843Q8N446 348 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 DCLK2Q8N568 766 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 MAPKAPK5-AS1Q8N8E1 139 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 Q8NBF4 154 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 PRSS33Q8NF86 280 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 OR13C3Q8NGS6 347 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 CCDC107Q8WV48 283 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 AZIN2Q96A70 460 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 ERLEC1Q96DZ1 483 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 CCDC34Q96HJ3 373 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 SLC45A3Q96JT2 553 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 URM1Q9BTM9 101 aaKnown RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 NUP85Q9BW27 656 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 AGXT2Q9BYV1 514 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 PANK2Q9BZ23 570 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 CPVLQ9H3G5 476 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 ATP13A3Q9H7F0 1226 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 A4GALTQ9NPC4 353 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 SDR39U1Q9NRG7 319 aaPredicted RBP1.65□□□□□ -2.15
COMMD3-209ENST00000471350 SETD4Q9NVD3 440 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 PANK4Q9NVE7 773 aa1.65□□□□□ -2.15
COMMD3-209ENST00000471350 IRAK4Q9NWZ3 460 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms