RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 KIR2DS3Q14952 304 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 ZNF805Q5CZA5 627 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 BMP2KLQ5H9B9 411 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 WDR38Q5JTN6 314 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 CCDC158Q5M9N0 1113 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 MMS22LQ6ZRQ5 1243 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 HACE1Q8IYU2 909 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 ADSSL1Q8N142 457 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 TMEM116Q8NCL8 245 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 CTCFLQ8NI51 663 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-202ENST00000471307 ETNPPLQ8TBG4 499 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 UTP15Q8TED0 518 aaKnown RBP5.16□□□□□ -1.58
CCDC39-202ENST00000471307 NEUROD6Q96NK8 337 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 RANGRFQ9HD47 186 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-202ENST00000471307 ECHDC1Q9NTX5 307 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 CNOT8Q9UFF9 292 aaKnown RBP5.16□□□□□ -1.58
CCDC39-202ENST00000471307 TMEM184BQ9Y519 407 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-202ENST00000471307 CLIC4Q9Y696 253 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 ANKRD31Q8N7Z5 1873 aa5.15□□□□□ -1.58
CCDC39-202ENST00000471307 SMCHD1A6NHR9 2005 aa5.15□□□□□ -1.58
CCDC39-202ENST00000471307 CASZ1Q86V15 1759 aa5.15□□□□□ -1.58
CCDC39-202ENST00000471307 A0A1W2PQF6 199 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 C1orf226A1L170 272 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 CAVIN2O95810 425 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 MCCP23508 829 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 NR2F2P24468 414 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 CASP6P55212 293 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 SEPT14Q6ZU15 432 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 C15orf52Q6ZUT6 534 aaKnown RBP5.15□□□□□ -1.59
CCDC39-202ENST00000471307 Q75L30 129 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 DGLUCYQ7Z3D6 616 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 R3HCC1LQ7Z5L2 792 aaKnown RBP5.15□□□□□ -1.59
CCDC39-202ENST00000471307 PM20D2Q8IYS1 436 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 CNTROBQ8N137 903 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 STPG4Q8N801 248 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 SLC38A9Q8NBW4 561 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 PPP4R1Q8TF05 950 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 ZNF622Q969S3 477 aaKnown RBP eCLIP5.15□□□□□ -1.59
CCDC39-202ENST00000471307 COPG2Q9UBF2 871 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 DBNLQ9UJU6 430 aaKnown RBP5.15□□□□□ -1.59
CCDC39-202ENST00000471307 ATP6V0A2Q9Y487 856 aa5.15□□□□□ -1.59
CCDC39-202ENST00000471307 C10orf71Q711Q0 1435 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 A0A0G2JNG1 304 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 C15orf62A8K5M9 175 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 MAP2K7O14733 419 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 ATP2A1O14983 1001 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 HCRTR2O43614 444 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 NDUFS3O75489 264 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 TMEM63AO94886 807 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 UQCRFS1P1P0C7P4 283 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 PATE4P0C8F1 98 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 BDNFP23560 247 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 CTSCP53634 463 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 LRMPQ12912 555 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 KIR2DS5Q14953 304 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 RAB6CQ53S08 254 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 CAVIN4Q5BKX8 364 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 TECRLQ5HYJ1 363 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 INTS11Q5TA45 600 aaKnown RBP5.14□□□□□ -1.59
CCDC39-202ENST00000471307 PIWIL4Q7Z3Z4 852 aaKnown RBP5.14□□□□□ -1.59
CCDC39-202ENST00000471307 RFFLQ8WZ73 363 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 MOV10L1Q9BXT6 1211 aaKnown RBP5.14□□□□□ -1.59
CCDC39-202ENST00000471307 RAB6CQ9H0N0 254 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 PDZD7Q9H5P4 517 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 ZBTB20Q9HC78 741 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-202ENST00000471307 TNRC6CQ9HCJ0 1690 aaKnown RBP5.14□□□□□ -1.59
CCDC39-202ENST00000471307 ZNF609O15014 1411 aa5.14□□□□□ -1.59
CCDC39-202ENST00000471307 KIF13BQ9NQT8 1826 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 LRP5O75197 1615 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 A0A0G2JLW4 131 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 CCNDBP1O95273 360 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 SPARCP09486 303 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 DPEP1P16444 411 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 ALDH4A1P30038 563 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 ADORA1P30542 326 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 TAS2R40P59535 323 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 ASPRV1Q53RT3 343 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 NSUN5P2Q63ZY6 315 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 CASC1Q6TDU7 716 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 APLFQ8IW19 511 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-202ENST00000471307 DIS3L2Q8IYB7 885 aaKnown RBP5.13□□□□□ -1.59
CCDC39-202ENST00000471307 GCSAMQ8N6F7 178 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 EMC1Q8N766 993 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 TRIM58Q8NG06 486 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 TBC1D16Q8TBP0 767 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 HM13Q8TCT9 377 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 ASCL2Q99929 193 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 GFRA4Q9GZZ7 299 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 BOLA2Q9H3K6 86 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 ACAD8Q9UKU7 415 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 SPEF2Q9C093 1822 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 NOTCH3Q9UM47 2321 aa5.13□□□□□ -1.59
CCDC39-202ENST00000471307 SLX4Q8IY92 1834 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 TMEM178BH3BS89 294 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 HIP1O00291 1037 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 UFL1O94874 794 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 MLYCDO95822 493 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 CLEC3BP05452 202 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 ERVK-10P10266 1014 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 PSMA4P25789 261 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms