RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZNF148Q9UQR1 794 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 PCDHGA6Q9Y5G7 932 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 HEMK1Q9Y5R4 338 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-211ENST00000471260 BSNQ9UPA5 3926 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 OR6C74A6NCV1 312 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 C21orf140B9A014 251 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 E7EVH7 732 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 PGRMC1O00264 195 aaKnown RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 CCL22O00626 93 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 TERTO14746 1132 aaKnown RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 LIN7AO14910 233 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 NKX2-8O15522 239 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 IFNB1P01574 187 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 FTH1P02794 183 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 FOLR1P15328 257 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 ADRA1DP25100 572 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 DLSTP36957 453 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 CDKN1CP49918 316 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 POLE2P56282 527 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 PPP1CAP62136 330 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 SEMA5AQ13591 1074 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 RPS6KA1Q15418 735 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 DRICH1Q6PGQ1 229 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 C4orf22Q6V702 233 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 PACS1Q6VY07 963 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 CERS6Q6ZMG9 384 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 PIANPQ8IYJ0 282 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 UNC5BQ8IZJ1 945 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 LILRA3Q8N6C8 439 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 GALNT6Q8NCL4 622 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 OR4E2Q8NGC2 313 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 OR52K1Q8NGK4 314 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 APOBEC4Q8WW27 367 aaKnown RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 MAIP1Q8WWC4 291 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 LCN9Q8WX39 176 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 SEC14L1Q92503 715 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 FERD3LQ96RJ6 166 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 TFB2MQ9H5Q4 396 aaKnown RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 LATS2Q9NRM7 1088 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 C1GALT1Q9NS00 363 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 FGF21Q9NSA1 209 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 PAK5Q9P286 719 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 FAM8A1Q9UBU6 413 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 IL17BQ9UHF5 180 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 TTC7AQ9ULT0 858 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-211ENST00000471260 BTRCQ9Y297 605 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 ZNF462Q96JM2 2506 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 PIEZO2Q9H5I5 2752 aa13.13□□□□□ -0.31
HMGN1-211ENST00000471260 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 AP3B1O00203 1094 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 MAP3K7O43318 606 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 MSL3P1P0C860 447 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 MYBL2P10244 700 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 PPARGP37231 505 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 KPNA2P52292 529 aaKnown RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 KCNAB2Q13303 367 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 CCNG2Q16589 344 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 DBN1Q16643 649 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 PWWP2BQ6NUJ5 590 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 DUS1LQ6P1R4 473 aaKnown RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 PPP1R21Q6ZMI0 780 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 RASGEF1CQ8N431 466 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 CLDN19Q8N6F1 224 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 CCDC89Q8N998 374 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 NAT14Q8WUY8 206 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 TFGQ92734 400 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 NAP1L3Q99457 506 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 SRMSQ9H3Y6 488 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 LHX9Q9NQ69 397 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 CASS4Q9NQ75 786 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 SMARCAL1Q9NZC9 954 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 DMGDHQ9UI17 866 aaKnown RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 CROTQ9UKG9 612 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 POMT2Q9UKY4 750 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 DRG1Q9Y295 367 aaKnown RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 HELZ2Q9BYK8 2649 aaKnown RBP13.12□□□□□ -0.31
HMGN1-211ENST00000471260 PIKFYVEQ9Y2I7 2098 aa13.12□□□□□ -0.31
HMGN1-211ENST00000471260 AGPSO00116 658 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 SLC28A2O43868 658 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 OR56A5P0C7T3 313 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 POLR2CP19387 275 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-211ENST00000471260 PDHA2P29803 388 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 PRDX3P30048 256 aaKnown RBP13.11□□□□□ -0.31
HMGN1-211ENST00000471260 FOXN2P32314 431 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 ACVR1Q04771 509 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 KCNAB1Q14722 419 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 TSTD2Q5T7W7 516 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 AFTPHQ6ULP2 937 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 OR13J1Q8NGT2 312 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 ZNF501Q96CX3 271 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-211ENST00000471260 ELMO2Q96JJ3 720 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 LRFN5Q96NI6 719 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 GPR87Q9BY21 358 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 FANCEQ9HB96 536 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 EIF2B3Q9NR50 452 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms