RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 CAPRIN1Q14444 709 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 OCLNQ16625 522 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 KCTD21Q4G0X4 260 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 HABP4Q5JVS0 413 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 C6orf136Q5SQH8 315 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 ATXN7L2Q5T6C5 722 aaPredicted RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 NAIF1Q69YI7 327 aaPredicted RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 BORAQ6PGQ7 559 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 IYDQ6PHW0 289 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 TTC33Q6PID6 262 aaPredicted RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 LINC00114Q6XXX2 140 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 B3GNT6Q6ZMB0 384 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 CYHR1Q6ZMK1 362 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 MACC1Q6ZN28 852 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 DDX53Q86TM3 631 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 SATL1Q86VE3 508 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 TMEM173Q86WV6 379 aaPredicted RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 PTRH1Q86Y79 214 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 SPPL2CQ8IUH8 684 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 CHERPQ8IWX8 916 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 FAM217AQ8IXS0 508 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 GPR65Q8IYL9 337 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 CMTR2Q8IYT2 770 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 SLC39A11Q8N1S5 342 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 DPP10Q8N608 796 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 MFSD2AQ8NA29 543 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 TRPV3Q8NET8 790 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 OR4F6Q8NGB9 312 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 OR2AP1Q8NGE2 309 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 OR8J3Q8NGG0 315 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 DNAJB14Q8TBM8 379 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 BCL7CQ8WUZ0 217 aaPredicted RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 CANT1Q8WVQ1 401 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 NCSTNQ92542 709 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 GFM2Q969S9 779 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 TMEM125Q96AQ2 219 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 SCLYQ96I15 445 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 HIST1H2AHQ96KK5 128 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 HIST1H2AJQ99878 128 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 SLC39A3Q9BRY0 314 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 C17orf80Q9BSJ5 609 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 H2AFJQ9BTM1 129 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 C1orf50Q9BV19 199 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 TM6SF2Q9BZW4 377 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 DPY30Q9C005 99 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 CIPCQ9C0C6 399 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 RNF38Q9H0F5 515 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 RMND5AQ9H871 391 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 IPPKQ9H8X2 491 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 CLK4Q9HAZ1 481 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 RDH14Q9HBH5 336 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 LATS2Q9NRM7 1088 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 AGPAT4Q9NRZ5 378 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 TUBA8Q9NY65 449 aaPredicted RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 PKD2L2Q9NZM6 624 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 PTBP2Q9UKA9 531 aaKnown RBP7.85□□□□□ -1.15
SMC4-212ENST00000470240 MED16Q9Y2X0 877 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 PLXNA4Q9HCM2 1894 aa7.85□□□□□ -1.15
SMC4-212ENST00000470240 ZNF106Q9H2Y7 1883 aaKnown RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 ABHD14A-ACY1A0A1B0GW23 586 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 K7EPI3 171 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 FXYD1O00168 92 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ARNTLO00327 626 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 QSOX1O00391 747 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 PPP6CO00743 305 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 GRM6O15303 877 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 HTRA2O43464 458 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 ULK1O75385 1050 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 RASAL1O95294 804 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 GUCA1CO95843 209 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ALBP02768 609 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 C8GP07360 202 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ANXA6P08133 673 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SMIM18P0DKX4 95 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SLC2A4P14672 509 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 JAK1P23458 1154 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 TTKP33981 857 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 MAPK9P45984 424 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 HSPA7P48741 367 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CDKN1CP49918 316 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 HK3P52790 923 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 DIO3P55073 304 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ERVPABLB-1P60509 514 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 UFM1P61960 85 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 POLR2LP62875 67 aaKnown RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 MYBPC1Q00872 1141 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 PRKCQQ04759 706 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CHRNB3Q05901 458 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SP140Q13342 867 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 PWP1Q13610 501 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 APOFQ13790 326 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ARHGEF7Q14155 803 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ATP6AP1Q15904 470 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SLC5A9Q2M3M2 681 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 AP5B1Q2VPB7 878 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 FUT11Q495W5 492 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SETMARQ53H47 684 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 FOXB2Q5VYV0 432 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CYP20A1Q6UW02 462 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms