RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SLCO1A2P46721 670 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 NUMBP49757 651 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 SERPINB8P50452 374 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 AFF3P51826 1226 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 DGKEP52429 567 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TAS2R38P59533 333 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 CNTN1Q12860 1018 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 CTBP1Q13363 440 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 NFATC2Q13469 925 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 PTPRCAPQ14761 206 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 EFTUD2Q15029 972 aaKnown RBP eCLIP5.41□□□□□ -1.549e-7■■■■□ 20.8
VPS41-211ENST00000466017 TMED2Q15363 201 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 CHRNA6Q15825 494 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 LDLRAP1Q5SW96 308 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 MROH9Q5TGP6 573 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 AGBL4Q5VU57 503 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ZNF470Q6ECI4 717 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 KIAA1161Q6NSJ0 714 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 UGT3A1Q6NUS8 523 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 CNSTQ6PJW8 725 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 MACC1Q6ZN28 852 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 RGS9BPQ6ZS82 235 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 Q6ZVL8 140 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 USP53Q70EK8 1073 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 HSD11B1LQ7Z5J1 315 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 CLEC14AQ86T13 490 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TSPAN33Q86UF1 283 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 MMAAQ8IVH4 418 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 DENND6AQ8IWF6 608 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 RBFAQ8N0V3 343 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 Q8N1Y9 231 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 DCLK2Q8N568 766 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 PAF1Q8N7H5 531 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ZNF366Q8N895 744 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TXNDC5Q8NBS9 432 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 DDHD1Q8NEL9 900 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 LPGAT1Q92604 370 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 KCNJ9Q92806 393 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 DTD2Q96FN9 168 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 SIPA1Q96FS4 1042 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 SERAC1Q96JX3 654 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 BIRC8Q96P09 236 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 LENG8Q96PV6 779 aaPredicted RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 ASB2Q96Q27 587 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 SMIM14Q96QK8 99 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 OMDQ99983 421 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ZSCAN5AQ9BUG6 496 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ABCG8Q9H221 673 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 VPS11Q9H270 941 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ASB8Q9H765 288 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 SUDS3Q9H7L9 328 aaPredicted RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 LMAN1LQ9HAT1 526 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 UGT1A7Q9HAW7 530 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 UGT1A10Q9HAW8 530 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 UGT1A8Q9HAW9 530 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 SGK2Q9HBY8 427 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 PREBQ9HCU5 417 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ARHGEF3Q9NR81 526 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 POLR3BQ9NW08 1133 aaPredicted RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 CTNNAL1Q9UBT7 734 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TBK1Q9UHD2 729 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 MID2Q9UJV3 735 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ADAM21Q9UKJ8 722 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 NCKAP1Q9Y2A7 1128 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 MTO1Q9Y2Z2 717 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 PLLPQ9Y342 182 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 X6R8D5 127 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TCF20Q9UGU0 1960 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 RANBP2P49792 3224 aaKnown RBP5.4□□□□□ -1.54
VPS41-211ENST00000466017 A0A087X1B8 175 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 A0A096LPK6 155 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 CCDC163A0A0D9SF12 145 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 C17orf113A0A1B0GUU1 675 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 KLHL33A6NCF5 533 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 ANTXRLA6NF34 631 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 FAM47DPA6NHR8 397 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 GPR89AB7ZAQ6 455 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 KPNA5O15131 536 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 BIRC5O15392 142 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 BUD23O43709 281 aaKnown RBP5.4□□□□□ -1.54
VPS41-211ENST00000466017 VEGFDO43915 354 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 KCNJ13O60928 360 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 ZNF217O75362 1048 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 TM7SF2O76062 418 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 RECQL5O94762 991 aaPredicted RBP5.4□□□□□ -1.54
VPS41-211ENST00000466017 ASMTLO95671 621 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 APOA4P06727 396 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 C8BP07358 591 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 INHBBP09529 407 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 ELFN1P0C7U0 828 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 GPR89BP0CG08 455 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 CREB1P16220 341 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 FDXRP22570 491 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 SP100P23497 879 aaPredicted RBP5.4□□□□□ -1.54
VPS41-211ENST00000466017 ACRV1P26436 265 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 OXTRP30559 389 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 TRIM23P36406 574 aa5.4□□□□□ -1.54
VPS41-211ENST00000466017 MDH1P40925 334 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms