RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ATL1Q8WXF7 558 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 PYURFQ96I23 114 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 GPR21Q99679 349 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 NACA2Q9H009 215 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 TMEM248Q9NWD8 314 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 CD274Q9NZQ7 290 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 EIF3LQ9Y262 564 aaKnown RBP19.37■□□□□ 0.69
SDF4-205ENST00000465727 MBLAC1A4D2B0 266 aaPredicted RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 NFKBIEO00221 500 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 FAM20BO75063 409 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 VPS26AO75436 327 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 CAPN1P07384 714 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 POLR2EP19388 210 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 IGFBP6P24592 240 aaPredicted RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 FMO4P31512 558 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 NR4A2P43354 598 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 CES5AQ6NT32 575 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 FAM171BQ6P995 826 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 USP43Q70EL4 1123 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 CYP4Z1Q86W10 505 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 OR52B6Q8NGF0 335 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 RPL3LQ92901 407 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 CDKN2AIPNLQ96HQ2 116 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 SIGLEC11Q96RL6 698 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 NXF2Q9GZY0 626 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 RIBC2Q9H4K1 309 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 TM9SF3Q9HD45 589 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 NDRG4Q9ULP0 352 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 U3KQV3 271 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 FZD9O00144 591 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 CXCL11O14625 94 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 FKBP9O95302 570 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 MOCS2O96007 188 aaPredicted RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 SERPINA1P01009 418 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 KRT8P05787 483 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 HAPLN1P10915 354 aaPredicted RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 CLK3P49761 638 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 DEFA1P59665 94 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 DEFA3P59666 94 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 PPP1R8Q12972 351 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 MAD2L1BPQ15013 274 aaPredicted RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 PROX2Q3B8N5 592 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 COLEC12Q5KU26 742 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 KDM4DQ6B0I6 523 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 AFTPHQ6ULP2 937 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 CLIP4Q8N3C7 705 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 TRPM4Q8TD43 1214 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 PDLIM5Q96HC4 596 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 ZFP42Q96MM3 310 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 SERPINB11Q96P15 392 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 POLR1EQ9GZS1 481 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 IKZF5Q9H5V7 419 aa19.36■□□□□ 0.69
SDF4-205ENST00000465727 TNPO3Q9Y5L0 923 aaKnown RBP19.36■□□□□ 0.69
SDF4-205ENST00000465727 HAT1O14929 419 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 NDUFS3O75489 264 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 SNX4O95219 450 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 TSPAN12O95859 305 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 S100BP04271 92 aaPredicted RBP19.35■□□□□ 0.69
SDF4-205ENST00000465727 PBX3P40426 434 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 SEPHS1P49903 392 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 GBX1Q14549 363 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 PTPRCAPQ14761 206 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 ZNF792Q3KQV3 632 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 RFTN2Q52LD8 501 aaPredicted RBP19.35■□□□□ 0.69
SDF4-205ENST00000465727 DESI1Q6ICB0 168 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 HEATR4Q86WZ0 1026 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 ELMOD1Q8N336 334 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 PGBD5Q8N414 524 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 PSMG2Q969U7 264 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 GAD1Q99259 594 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 ACBD6Q9BR61 282 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 ZYG11BQ9C0D3 744 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 PRDM5Q9NQX1 630 aaPredicted RBP19.35■□□□□ 0.69
SDF4-205ENST00000465727 NLE1Q9NVX2 485 aaPredicted RBP19.35■□□□□ 0.69
SDF4-205ENST00000465727 SLC25A37Q9NYZ2 338 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 NUDT4Q9NZJ9 180 aa19.35■□□□□ 0.69
SDF4-205ENST00000465727 HECAQ9UBI9 543 aaPredicted RBP19.35■□□□□ 0.69
SDF4-205ENST00000465727 MICAL3Q7RTP6 2002 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 AIREO43918 545 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 MITFO75030 526 aaPredicted RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 S100A5P33763 92 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 HTR6P50406 440 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 HK3P52790 923 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 IL2P60568 153 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 COPZ1P61923 177 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 PLIN5Q00G26 463 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 IL10RBQ08334 325 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 SIM2Q14190 667 aaPredicted RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 LAIR1Q6GTX8 287 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 SNX20Q7Z614 316 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 GALNT5Q7Z7M9 940 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 CALHM3Q86XJ0 350 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 MSRB3Q8IXL7 192 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 CARNMT1Q8N4J0 409 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 TBCDQ9BTW9 1192 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 KATNBL1Q9H079 304 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 CCDC59Q9P031 241 aaKnown RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 TRMT6Q9UJA5 497 aaKnown RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 KCNH4Q9UQ05 1017 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 IDH3BO43837 385 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms