RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PDGFCQ9NRA1 345 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SFMBT1Q9UHJ3 866 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 OSGIN1Q9UJX0 560 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 RPS6KA6Q9UK32 745 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 NUDT5Q9UKK9 219 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CAB39Q9Y376 341 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 PCDHGA8Q9Y5G5 932 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 DGKBQ9Y6T7 804 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 EVPLQ92817 2033 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MROH6A6NGR9 719 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 AGAP5A6NIR3 686 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 WASH4PA8MWX3 477 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 TTC34A8MYJ7 566 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM220BPB1ANY3 271 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PTGES3LE9PB15 166 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 J3QW42 95 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 UBFD1O14562 309 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PRMT5O14744 637 aaPredicted RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NRP1O14786 923 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 AURKAO14965 403 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RGS14O43566 566 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 DPM1O60762 260 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM20BO75063 409 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 VPS26AO75436 327 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PMPCBO75439 489 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RPP40O75818 363 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CCNKO75909 580 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 WDR47O94967 919 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 C1RP00736 705 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 LINC00032P0C843 101 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 TXNP10599 105 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NCF1P14598 390 aaPredicted RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF37AP17032 561 aaPredicted RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PCMT1P22061 227 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CES1P23141 567 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 HRH2P25021 359 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ARNTP27540 789 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PSMB9P28065 219 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CCR1P32246 355 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 KRT20P35900 424 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 POLR2IP36954 125 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ETV6P41212 452 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CASP3P42574 277 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PIK3CGP48736 1102 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ALDH9A1P49189 494 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PLK1P53350 603 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 GP2P55259 537 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 GNG2P59768 71 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC35A2P78381 396 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ADAM17P78536 824 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MRPS15P82914 257 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 EMX1Q04741 257 aaPredicted RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ACVR1Q04771 509 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 FCHO2Q0JRZ9 810 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 AQP6Q13520 282 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 GRB7Q14451 532 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CLCA4Q14CN2 919 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NPTX1Q15818 432 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RBBP7Q16576 425 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MEP1AQ16819 746 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 DDR2Q16832 855 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PFKFB4Q16877 469 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 IMPG1Q17R60 797 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 LY6KQ17RY6 165 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 PGS1Q32NB8 556 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ZFP69Q49AA0 526 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RABL3Q5HYI8 236 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RAB41Q5JT25 222 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RBM20Q5T481 1227 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 GPR158Q5T848 1215 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CACHD1Q5VU97 1274 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 UBE2UQ5VVX9 321 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 AGAP6Q5VW22 663 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MLIPQ5VWP3 458 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 SPESP1Q6UW49 350 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 OTOP3Q7RTS5 596 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 LYSMD2Q8IV50 215 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MFSD6LQ8IWD5 586 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 TMEM132CQ8N3T6 1108 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 DTWD1Q8N5C7 304 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NPWQ8N729 165 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RTL3Q8N8U3 475 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ASCC1Q8N9N2 400 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 FNDC5Q8NAU1 212 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 GTF3C2Q8WUA4 911 aaPredicted RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 DPF3Q92784 378 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ISG20Q96AZ6 181 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 IMP4Q96G21 291 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MED30Q96HR3 178 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CEP19Q96LK0 163 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MAGEB10Q96LZ2 347 aaPredicted RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 AGAP4Q96P64 663 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 MBOAT4Q96T53 435 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CSF3RQ99062 836 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 HERC2P3Q9BVR0 1158 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 SPATA9Q9BWV2 254 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ULBP1Q9BZM6 244 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 SPATC1LQ9H0A9 340 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 DCSTAMPQ9H295 470 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 DPEP3Q9H4B8 488 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms