RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 TEKT5Q96M29 485 aa12.86□□□□□ -0.35
MRPL55-224ENST00000464148 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
MRPL55-224ENST00000464148 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
MRPL55-224ENST00000464148 TXLNGQ9NUQ3 528 aa12.86□□□□□ -0.35
MRPL55-224ENST00000464148 IRAK4Q9NWZ3 460 aa12.86□□□□□ -0.35
MRPL55-224ENST00000464148 UVRAGQ9P2Y5 699 aa12.86□□□□□ -0.35
MRPL55-224ENST00000464148 C2CD3Q4AC94 2353 aa12.86□□□□□ -0.35
MRPL55-224ENST00000464148 ZNF487B1APH4 448 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 AGPSO00116 658 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 IFRD1O00458 451 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 E2F3O00716 465 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 EPOP01588 193 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 RALBP11234 206 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 NFKB1P19838 968 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 PTPN3P26045 913 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 TSFMP43897 325 aaKnown RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 FOXL2P58012 376 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 PTPRCAPQ14761 206 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 DEFB110Q30KQ9 67 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 AGAP7PQ5VUJ5 663 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 RHBDD2Q6NTF9 364 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 KDELC1Q6UW63 502 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 AMIGO1Q86WK6 493 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 PHC3Q8NDX5 983 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 OR52E1Q8NGJ3 308 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 HM13Q8TCT9 377 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 PROKR1Q8TCW9 393 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 COG1Q8WTW3 980 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 FAR1Q8WVX9 515 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 SYN2Q92777 582 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 LINC00615Q96LM1 132 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 AGAP4Q96P64 663 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 NRTNQ99748 197 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 TFB2MQ9H5Q4 396 aaKnown RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 XKR8Q9H6D3 395 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 ASB8Q9H765 288 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 ACTR10Q9NZ32 417 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 DHCR7Q9UBM7 475 aaKnown RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
MRPL55-224ENST00000464148 DIDO1Q9BTC0 2240 aaKnown RBP12.85□□□□□ -0.35
MRPL55-224ENST00000464148 A0A1B0GTH6 734 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 A0A1W2PQJ5 194 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 UMODP07911 640 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 PRKG2Q13237 762 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 MESDQ14696 234 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 ZNF169Q14929 603 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-224ENST00000464148 SLC1A5Q15758 541 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 NKAIN1Q4KMZ8 207 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 FIGNQ5HY92 759 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 SPESP1Q6UW49 350 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 FAM180AQ6UWF9 173 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 ZNF655Q8N720 491 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-224ENST00000464148 C19orf47Q8N9M1 422 aaKnown RBP12.84□□□□□ -0.35
MRPL55-224ENST00000464148 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 CTNNBL1Q8WYA6 563 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-224ENST00000464148 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.84□□□□□ -0.35
MRPL55-224ENST00000464148 MRGPRX2Q96LB1 330 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 FSD1LQ9BXM9 530 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 FAM60AQ9NP50 221 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 FBXL4Q9UKA2 621 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 ARL5AQ9Y689 179 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 CCDC88CQ9P219 2028 aa12.84□□□□□ -0.35
MRPL55-224ENST00000464148 POLEQ07864 2286 aa12.83□□□□□ -0.35
MRPL55-224ENST00000464148 C3orf70A6NLC5 250 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 ZSCAN9O15535 394 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 CNOT3O75175 753 aaKnown RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 ALOX12BO75342 701 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 SRP72O76094 671 aaKnown RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 SERPINC1P01008 464 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 KRT1P04264 644 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 TPM3P06753 285 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 STSP08842 583 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 CD68P34810 354 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 UBASH3AP57075 661 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 PRAMEF13Q5VWM6 474 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 B3GNTL1Q67FW5 361 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 MRPL14Q6P1L8 145 aaKnown RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 BZW1Q7L1Q6 419 aaKnown RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 TRIM73Q86UV7 250 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 PARP9Q8IXQ6 854 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 ADGRF3Q8IZF5 1079 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 TFB1MQ8WVM0 346 aaKnown RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 NDC1Q9BTX1 674 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 HGH1Q9BTY7 390 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 EPS8L2Q9H6S3 715 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 MVB12BQ9H7P6 319 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 SLC6A20Q9NP91 592 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-224ENST00000464148 CRLS1Q9UJA2 301 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 CDC23Q9UJX2 597 aa12.83□□□□□ -0.36
MRPL55-224ENST00000464148 MDC1Q14676 2089 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms