RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 TRIM44Q96DX7 344 aaPredicted RBP15.41■□□□□ 0.06
ERCC3-206ENST00000462306 FAM167BQ9BTA0 163 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 HGH1Q9BTY7 390 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 B3GNT4Q9C0J1 378 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 ZNF768Q9H5H4 540 aaKnown RBP15.41■□□□□ 0.06
ERCC3-206ENST00000462306 LATS2Q9NRM7 1088 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 IARS2Q9NSE4 1012 aaKnown RBP15.41■□□□□ 0.06
ERCC3-206ENST00000462306 GALPQ9UBC7 116 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 ZC3H7BQ9UGR2 993 aaKnown RBP15.41■□□□□ 0.06
ERCC3-206ENST00000462306 ACSL6Q9UKU0 697 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 MED16Q9Y2X0 877 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 PCDHGA3Q9Y5H0 932 aa15.41■□□□□ 0.06
ERCC3-206ENST00000462306 KIF2AO00139 706 aaPredicted RBP15.4■□□□□ 0.06
ERCC3-206ENST00000462306 BTN3A3O00478 584 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 HAUS5O94927 633 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 MPP1Q00013 466 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 MC2RQ01718 297 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 ABRQ12979 859 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 PDIA2Q13087 525 aaKnown RBP15.4■□□□□ 0.06
ERCC3-206ENST00000462306 CALCOCO2Q13137 446 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 GBX1Q14549 363 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 FASTKD3Q14CZ7 662 aaKnown RBP15.4■□□□□ 0.06
ERCC3-206ENST00000462306 PLEKHS1Q5SXH7 462 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 CACHD1Q5VU97 1274 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 OTOAQ7RTW8 1153 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 OOSP2Q86WS3 158 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 FAM129CQ86XR2 697 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 CNTN4Q8IWV2 1026 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 C2CD4AQ8NCU7 369 aaPredicted RBP15.4■□□□□ 0.06
ERCC3-206ENST00000462306 ZNF248Q8NDW4 579 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 ART4Q93070 314 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 FAM136AQ96C01 138 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 CERS2Q96G23 380 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 CFAP36Q96G28 342 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 DCBLD2Q96PD2 775 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 TAAR9Q96RI9 348 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 TRIT1Q9H3H1 467 aaKnown RBP15.4■□□□□ 0.06
ERCC3-206ENST00000462306 SRMSQ9H3Y6 488 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 XKR8Q9H6D3 395 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 SIDT1Q9NXL6 827 aaKnown RBP15.4■□□□□ 0.06
ERCC3-206ENST00000462306 FOXJ2Q9P0K8 574 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 POLG2Q9UHN1 485 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 ICKQ9UPZ9 632 aa15.4■□□□□ 0.06
ERCC3-206ENST00000462306 IGHV5-51A0A0C4DH38 117 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 RASSF9O75901 435 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 POLR2CP19387 275 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-206ENST00000462306 CHRM3P20309 590 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 GABRB3P28472 473 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 SEPHS1P49903 392 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 CLCN7P51798 805 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 KPNA2P52292 529 aaKnown RBP15.39■□□□□ 0.05
ERCC3-206ENST00000462306 FRG1Q14331 258 aaKnown RBP15.39■□□□□ 0.05
ERCC3-206ENST00000462306 TRADDQ15628 312 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 TRMT10BQ6PF06 316 aaKnown RBP15.39■□□□□ 0.05
ERCC3-206ENST00000462306 CNSTQ6PJW8 725 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 UNC5DQ6UXZ4 953 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 AMIGO1Q86WK6 493 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 ANKMY2Q8IV38 441 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 ADGRF3Q8IZF5 1079 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 UBXN4Q92575 508 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 CD180Q99467 661 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 MAP3K3Q99759 626 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 DDA1Q9BW61 102 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 FBXO8Q9NRD0 319 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 SLC39A1Q9NY26 324 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 UTP11Q9Y3A2 253 aaKnown RBP15.39■□□□□ 0.05
ERCC3-206ENST00000462306 B3GALT1Q9Y5Z6 326 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 MRFAP1Q9Y605 127 aa15.39■□□□□ 0.05
ERCC3-206ENST00000462306 TLCD2A6NGC4 264 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 BTN3A1O00481 513 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 RRP8O43159 456 aaKnown RBP15.38■□□□□ 0.05
ERCC3-206ENST00000462306 NELFEP18615 380 aaKnown RBP15.38■□□□□ 0.05
ERCC3-206ENST00000462306 ITPKBP27987 946 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 CARSP49589 748 aaKnown RBP15.38■□□□□ 0.05
ERCC3-206ENST00000462306 GRB7Q14451 532 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 DNTTIP2Q5QJE6 756 aaKnown RBP15.38■□□□□ 0.05
ERCC3-206ENST00000462306 TEDDM1Q5T9Z0 273 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 TMEM164Q5U3C3 297 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 ANKS6Q68DC2 871 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 ARMC6Q6NXE6 501 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 FBXO36Q8NEA4 188 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 GIMAP7Q8NHV1 300 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 KCNJ9Q92806 393 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 NAF1Q96HR8 494 aaKnown RBP15.38■□□□□ 0.05
ERCC3-206ENST00000462306 SLC41A2Q96JW4 573 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 PPM1MQ96MI6 270 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 SLC30A3Q99726 388 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 TWSG1Q9GZX9 223 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 RAB17Q9H0T7 212 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 APMAPQ9HDC9 416 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 SLC17A6Q9P2U8 582 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 POMT2Q9UKY4 750 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 TDRKHQ9Y2W6 561 aaKnown RBP15.38■□□□□ 0.05
ERCC3-206ENST00000462306 CACNA1BQ00975 2339 aa15.38■□□□□ 0.05
ERCC3-206ENST00000462306 E5RI56 91 aa15.37■□□□□ 0.05
ERCC3-206ENST00000462306 MATN2O00339 956 aa15.37■□□□□ 0.05
ERCC3-206ENST00000462306 AHSGP02765 367 aa15.37■□□□□ 0.05
ERCC3-206ENST00000462306 ATP5DP30049 168 aa15.37■□□□□ 0.05
ERCC3-206ENST00000462306 SHMT2P34897 504 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms