RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 MAGEC1O60732 1142 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 DFFBO76075 338 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 CLDN1O95832 211 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 AGR2O95994 175 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 GPIP06744 558 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 KRTAP1-4P0C5Y4 121 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 ZSCAN5DPP0CG00 497 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 RBMS1P29558 406 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 PBX3P40426 434 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 TSFMP43897 325 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 LIMK2P53671 638 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 GEMIN4P57678 1058 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 PRAMEP78395 509 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 CEBPZQ03701 1054 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 COX10Q12887 443 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 PRKAA1Q13131 559 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 MOGAT2Q3SYC2 334 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 PDLIM3Q53GG5 364 aaPredicted RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 RARS2Q5T160 578 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 C20orf194Q5TEA3 1177 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 JAKMIP3Q5VZ66 844 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 SARM1Q6SZW1 724 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 CYP20A1Q6UW02 462 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 PCGF5Q86SE9 256 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 MARCH9Q86YJ5 346 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 C11orf53Q8IXP5 236 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 DIS3L2Q8IYB7 885 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 NME8Q8N427 588 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 DCLK2Q8N568 766 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 ESX1Q8N693 406 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 KBTBD8Q8NFY9 601 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 UBE2Q2Q8WVN8 375 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 ARHGEF2Q92974 986 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 SLC22A12Q96S37 553 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 DDOQ99489 341 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 HGH1Q9BTY7 390 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 PUS3Q9BZE2 481 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 JMJD4Q9H9V9 463 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 SAGE1Q9NXZ1 904 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 BCCIPQ9P287 314 aaKnown RBP eCLIP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 SWAP70Q9UH65 585 aa2.18□□□□□ -2.06
SYPL1-203ENST00000460770 LRRFIP2Q9Y608 721 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.18□□□□□ -2.06
SYPL1-203ENST00000460770 FAM237BA0A1B0GVD1 139 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 C15orf61A6NNL5 157 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 E9PI62 339 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 RTL8CO15255 209 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 SRPRAP08240 638 aaKnown RBP2.17□□□□□ -2.06
SYPL1-203ENST00000460770 ACP2P11117 423 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 PRKACGP22612 351 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 CA4P22748 312 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 PSMA4P25789 261 aaKnown RBP2.17□□□□□ -2.06
SYPL1-203ENST00000460770 ICAM3P32942 547 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 MAN1A1P33908 653 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 CX3CL1P78423 397 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 PAX8Q06710 450 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 EIF4A2Q14240 407 aaKnown RBP2.17□□□□□ -2.06
SYPL1-203ENST00000460770 C15orf32Q32M92 178 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 MDH1BQ5I0G3 518 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 TMEM154Q6P9G4 183 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 MAATS1Q7Z4T9 603 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 R3HCC1LQ7Z5L2 792 aaKnown RBP2.17□□□□□ -2.06
SYPL1-203ENST00000460770 PTAR1Q7Z6K3 402 aaPredicted RBP2.17□□□□□ -2.06
SYPL1-203ENST00000460770 ZNF843Q8N446 348 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 NUP37Q8NFH4 326 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 MAPK15Q8TD08 544 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 MPP4Q96JB8 637 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 SLC45A3Q96JT2 553 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 FAM81BQ96LP2 452 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 C1orf74Q96LT6 269 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 ZNF582Q96NG8 517 aaPredicted RBP2.17□□□□□ -2.06
SYPL1-203ENST00000460770 ABHD6Q9BV23 337 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 FAM49AQ9H0Q0 323 aaPredicted RBP2.17□□□□□ -2.06
SYPL1-203ENST00000460770 SLA2Q9H6Q3 261 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 SH2D4AQ9H788 454 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 DNAJC18Q9H819 358 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 MED20Q9H944 212 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 POLR1BQ9H9Y6 1135 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 SPHK2Q9NRA0 654 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 FGF21Q9NSA1 209 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 TAB2Q9NYJ8 693 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 OR6C2Q9NZP2 312 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 RIPK3Q9Y572 518 aa2.17□□□□□ -2.06
SYPL1-203ENST00000460770 MEX3AA1L020 520 aaKnown RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 MPTX1A8MV57 137 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 EPM2AB3EWF7 344 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ZNF195O14628 629 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 TGFB1I1O43294 461 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 EPB41L2O43491 1005 aaKnown RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 HS6ST1O60243 411 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 RNASEH1O60930 286 aaKnown RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 EIF2S1P05198 315 aaKnown RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 HSP90AA1P07900 732 aaKnown RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 SIM2Q14190 667 aaPredicted RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 NCEH1Q6PIU2 408 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 FAM198BQ6UWH4 519 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ADGRA1Q86SQ6 560 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 TICAM1Q8IUC6 712 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 MCEMP1Q8IX19 187 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 KIRREL3Q8IZU9 778 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms