RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 IDH3BO43837 385 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 HS6ST1O60243 411 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 PEX14O75381 377 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 TMEM63AO94886 807 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 C22orf31O95567 290 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 IGKV3-15P01624 115 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 HSPA1AP0DMV8 641 aaKnown RBP1.66□□□□□ -2.14
PTPN22-203ENST00000460620 HSPA1BP0DMV9 641 aaKnown RBP1.66□□□□□ -2.14
PTPN22-203ENST00000460620 RBMS1P29558 406 aaKnown RBP1.66□□□□□ -2.14
PTPN22-203ENST00000460620 SLC6A6P31641 620 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 MMP12P39900 470 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 RGS2P41220 211 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 LIMK2P53671 638 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 CASP6P55212 293 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 PAX9P55771 341 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 CX3CL1P78423 397 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 PAX8Q06710 450 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 DLG2Q15700 870 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 PDLIM3Q53GG5 364 aaPredicted RBP1.66□□□□□ -2.14
PTPN22-203ENST00000460620 MDH1BQ5I0G3 518 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 GRTP1Q5TC63 336 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 MCEMP1Q8IX19 187 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 C17orf47Q8NEP4 570 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 KBTBD8Q8NFY9 601 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 ZNF519Q8TB69 540 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 TBC1D16Q8TBP0 767 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 ZKSCAN4Q969J2 545 aaPredicted RBP1.66□□□□□ -2.14
PTPN22-203ENST00000460620 AZIN2Q96A70 460 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 ELMOD3Q96FG2 381 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 FAM81BQ96LP2 452 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 VN1R1Q9GZP7 353 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 ARRDC1-AS1Q9H2J1 176 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 SETD4Q9NVD3 440 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 SAGE1Q9NXZ1 904 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 THEGQ9P2T0 379 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 MUTYHQ9UIF7 546 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 TUBE1Q9UJT0 475 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 CRYL1Q9Y2S2 319 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 CMAHPQ9Y471 501 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 RIPK3Q9Y572 518 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 LYVE1Q9Y5Y7 322 aa1.66□□□□□ -2.14
PTPN22-203ENST00000460620 PRSS51A0A1B0GVH4 220 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 RNASEH1O60930 286 aaKnown RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 DDX58O95786 925 aaKnown RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 SRPRAP08240 638 aaKnown RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 ITIH1P19827 911 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 PIK3R1P27986 724 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 NMBRP28336 390 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 CDC25CP30307 473 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 TMEM50BP56557 158 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 RPS3AP61247 264 aaKnown RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 PRAMEP78395 509 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 PNRC1Q12796 327 aaPredicted RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 CALCOCO2Q13137 446 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 TBCEQ15813 527 aaPredicted RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 HIGD2BQ4VC39 106 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 LYSMD4Q5XG99 296 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 TMEM198Q66K66 360 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 Q6ZRP5 223 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 PTAR1Q7Z6K3 402 aaPredicted RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 TBC1D1Q86TI0 1168 aaPredicted RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 MARCH9Q86YJ5 346 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 TICAM1Q8IUC6 712 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 ZNF584Q8IVC4 421 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 KIRREL3Q8IZU9 778 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 POM121L12Q8N7R1 296 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 ZPLD1Q8TCW7 415 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 RNF128Q8TEB7 428 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 FNBP1Q96RU3 617 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 GAD1Q99259 594 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 FGF21Q9NSA1 209 aa1.65□□□□□ -2.14
PTPN22-203ENST00000460620 EXO1Q9UQ84 846 aaKnown RBP1.65□□□□□ -2.14
PTPN22-203ENST00000460620 LIPT2A6NK58 231 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 A8MZ25 164 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 GAPDHSO14556 408 aaPredicted RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 TO15178 435 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 PRG2P13727 222 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 CYP2A7P20853 494 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 OPRL1P41146 370 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 LEPRP48357 1165 aaKnown RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 CCR9P51686 369 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 PDX1P52945 283 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 PPP2R2BQ00005 443 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 LY6DQ14210 128 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 MTHFSDQ2M296 383 aaKnown RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 MOGAT2Q3SYC2 334 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 INTS11Q5TA45 600 aaKnown RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 C20orf194Q5TEA3 1177 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 C11orf53Q8IXP5 236 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 SMAP1Q8IYB5 467 aaPredicted RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 Q8NBF4 154 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 PAPD5Q8NDF8 572 aaKnown RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 RFFLQ8WZ73 363 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 PRICKLE1Q96MT3 831 aaPredicted RBP1.64□□□□□ -2.15
PTPN22-203ENST00000460620 CPVLQ9H3G5 476 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 PLK3Q9H4B4 646 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 DNAJC18Q9H819 358 aa1.64□□□□□ -2.15
PTPN22-203ENST00000460620 A4GALTQ9NPC4 353 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms