RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PPP1R14DQ9NXH3 145 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 GULP1Q9UBP9 304 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 MOSPD1Q9UJG1 213 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 FANCMQ8IYD8 2048 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ZNF106Q9H2Y7 1883 aaKnown RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 SYNDIG1LA6NDD5 238 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 E5RI56 91 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 LSM1O15116 133 aaKnown RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 PLOD3O60568 738 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 WISP3O95389 354 aaPredicted RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 ESR1P03372 595 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 CAPNS1P04632 268 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 CHN1P15882 459 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 CCNFP41002 786 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 MAN2A2P49641 1150 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 CCR3P51677 355 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 RPL6Q02878 288 aaKnown RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ZNF542PQ5EBM4 170 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ACSBG2Q5FVE4 666 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 N4BP2L1Q5TBK1 243 aaPredicted RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 KIAA0895LQ68EN5 471 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 FAM45BPQ6NSW5 357 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 GCNT7Q6ZNI0 430 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 TRIM69Q86WT6 500 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 TRAPPC5Q8IUR0 188 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 PHYKPLQ8IUZ5 450 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 FAM45AQ8TCE6 357 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ISL2Q96A47 359 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ULK4Q96C45 1275 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 COX14Q96I36 57 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 APOPT1Q96IL0 206 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 GPR78Q96P69 363 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ORAI3Q9BRQ5 295 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 MECRQ9BV79 373 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 CDH19Q9H159 772 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 STMN4Q9H169 189 aaPredicted RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 SLC23A2Q9UGH3 650 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 EIF2B4Q9UI10 523 aaKnown RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 TLK1Q9UKI8 766 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ZMIZ1Q9ULJ6 1067 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 DNAJC16Q9Y2G8 782 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ACOT9Q9Y305 439 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 FAM186AA6NE01 2351 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 C10orf142B7Z368 130 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ZNF217O75362 1048 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 SNX4O95219 450 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 TRIM23P36406 574 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 PREPP48147 710 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 HSPA14Q0VDF9 509 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 BOP1Q14137 746 aaKnown RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 AGERQ15109 404 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 NEK5Q6P3R8 708 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ADAMTSL4Q6UY14 1074 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 MACC1Q6ZN28 852 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 RD3Q7Z3Z2 195 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 PIWIL4Q7Z3Z4 852 aaKnown RBP10.12□□□□□ -0.79
USP39-210ENST00000459775 CLEC14AQ86T13 490 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 CAMKK1Q8N5S9 505 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 LSMEM1Q8N8F7 131 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 PTERQ96BW5 349 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 SLC6A18Q96N87 628 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 APOOQ9BUR5 198 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 TEX101Q9BY14 249 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 MIR1-1HGQ9H1L0 117 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 TRIM39Q9HCM9 518 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 TAS2R13Q9NYV9 303 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 CIDEBQ9UHD4 219 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 GNPTGQ9UJJ9 305 aa10.12□□□□□ -0.79
USP39-210ENST00000459775 ABCA7Q8IZY2 2146 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 C17orf113A0A1B0GUU1 675 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 TK2O00142 265 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 CDC7O00311 574 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 MAP3K13O43283 966 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 AHCYL1O43865 530 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 LILRB5O75023 590 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 NDUFS2O75306 463 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 KATNA1O75449 491 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 EPN2O95208 641 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 TSPAN12O95859 305 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 CEACAM5P06731 702 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 SBK3P0C264 359 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 TDGF1P13385 188 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 ZNF37AP17032 561 aaPredicted RBP10.11□□□□□ -0.79
USP39-210ENST00000459775 HNRNPA2B1P22626 353 aaKnown RBP10.11□□□□□ -0.79
USP39-210ENST00000459775 RPS3P23396 243 aaKnown RBP eCLIP10.11□□□□□ -0.793e-13■■■■□ 26.3
USP39-210ENST00000459775 SERPINB3P29508 390 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 ADARP55265 1226 aaKnown RBP10.11□□□□□ -0.79
USP39-210ENST00000459775 RUNX1T1Q06455 604 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 ITIH4Q14624 930 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 FBXO48Q5FWF7 155 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 LDLRAP1Q5SW96 308 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 PRAMEF14Q5SWL7 426 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 LYPLAL1Q5VWZ2 237 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 FAM219BQ5XKK7 198 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 XKR5Q6UX68 686 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 ANGPTL8Q6UXH0 198 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 FAM83HQ6ZRV2 1179 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms