RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MAGEC3Q8TD91 643 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 SKA2Q8WVK7 121 aaPredicted RBP15.71■□□□□ 0.11
CD28-203ENST00000458610 KLHL6Q8WZ60 621 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 TRIM56Q9BRZ2 755 aaKnown RBP15.71■□□□□ 0.11
CD28-203ENST00000458610 KLHL42Q9P2K6 505 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 COL27A1Q8IZC6 1860 aaPredicted RBP15.7■□□□□ 0.1
CD28-203ENST00000458610 PMS2P1A4D2B8 440 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 TLCD2A6NGC4 264 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 RAD51CO43502 376 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 ATP5DP30049 168 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 ETV5P41161 510 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 ABCG1P45844 678 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 UCNP55089 124 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 ABRQ12979 859 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 PDIA2Q13087 525 aaKnown RBP15.7■□□□□ 0.1
CD28-203ENST00000458610 CBLBQ13191 982 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 MSS51Q4VC12 460 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 CTSL3PQ5NE16 218 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 TMTC4Q5T4D3 741 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 UGT3A1Q6NUS8 523 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 NAPRTQ6XQN6 538 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 BPHLQ86WA6 291 aaPredicted RBP15.7■□□□□ 0.1
CD28-203ENST00000458610 DENND6AQ8IWF6 608 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 RAB42Q8N4Z0 105 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 OR5AR1Q8NGP9 310 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 KIF18AQ8NI77 898 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 JPH3Q8WXH2 748 aaPredicted RBP15.7■□□□□ 0.1
CD28-203ENST00000458610 ART4Q93070 314 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 CERS2Q96G23 380 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 HGH1Q9BTY7 390 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 PPANQ9NQ55 473 aaKnown RBP15.7■□□□□ 0.1
CD28-203ENST00000458610 IARS2Q9NSE4 1012 aaKnown RBP15.7■□□□□ 0.1
CD28-203ENST00000458610 OCIAD1Q9NX40 245 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 OR6C2Q9NZP2 312 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 SEMA5BQ9P283 1151 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 TDRKHQ9Y2W6 561 aaKnown RBP15.7■□□□□ 0.1
CD28-203ENST00000458610 TEX264Q9Y6I9 313 aa15.7■□□□□ 0.1
CD28-203ENST00000458610 C2orf74A8MZ97 194 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 POLR1CO15160 346 aaPredicted RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 EIF3HO15372 352 aaKnown RBP eCLIP15.69■□□□□ 0.1
CD28-203ENST00000458610 PRAMEF10O60809 474 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 NELFEP18615 380 aaKnown RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 POLR2CP19387 275 aaPredicted RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 CCNFP41002 786 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 SKIV2L2P42285 1042 aaKnown RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 SLC1A2P43004 574 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 SEPHS1P49903 392 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 ILF2Q12905 390 aaKnown RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 FRG1Q14331 258 aaKnown RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 IL11RAQ14626 422 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 DUPD1Q68J44 220 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 DCUN1D3Q8IWE4 304 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 ZBTB2Q8N680 514 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 SIDT2Q8NBJ9 832 aaKnown RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 CFAP61Q8NHU2 1237 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 LKAAEAR1Q8TD35 194 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 KCNJ9Q92806 393 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 RAD51AP1Q96B01 352 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 CFAP36Q96G28 342 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 DPH5Q9H2P9 285 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 PDE7BQ9NP56 450 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 FBXO6Q9NRD1 293 aaPredicted RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 C1GALT1Q9NS00 363 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 IL1RAPL1Q9NZN1 696 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 CHMP2BQ9UQN3 213 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 CDYLQ9Y232 598 aa15.69■□□□□ 0.1
CD28-203ENST00000458610 URB1O60287 2271 aaKnown RBP15.69■□□□□ 0.1
CD28-203ENST00000458610 GSAPA4D1B5 854 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 C9orf172C9J069 976 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 E7ESA3 106 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 KLK10O43240 276 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 KIF1CO43896 1103 aaKnown RBP15.68■□□□□ 0.1
CD28-203ENST00000458610 NIPSNAP2O75323 286 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 VPS26AO75436 327 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 ZBTB11O95625 1053 aaPredicted RBP15.68■□□□□ 0.1
CD28-203ENST00000458610 ERVK-10P10266 1014 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 LIPCP11150 499 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 CDH3P22223 829 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 CARSP49589 748 aaKnown RBP15.68■□□□□ 0.1
CD28-203ENST00000458610 HSD11B2P80365 405 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 ACY1Q03154 408 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 FOXM1Q08050 763 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 HP1BP3Q5SSJ5 553 aaPredicted RBP15.68■□□□□ 0.1
CD28-203ENST00000458610 C8orf74Q6P047 294 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 UNC5AQ6ZN44 842 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 GALNT7Q86SF2 657 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 PALM2Q8IXS6 379 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 BMPERQ8N8U9 685 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 C2CD4AQ8NCU7 369 aaPredicted RBP15.68■□□□□ 0.1
CD28-203ENST00000458610 FBXO36Q8NEA4 188 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 PYROXD1Q8WU10 500 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 INPP5DQ92835 1189 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 SLC22A18Q96BI1 424 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 MAP3K3Q99759 626 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 RAB11FIP5Q9BXF6 653 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 POMT2Q9UKY4 750 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 SLC39A10Q9ULF5 831 aa15.68■□□□□ 0.1
CD28-203ENST00000458610 PIPSLA2A3N6 862 aa15.67■□□□□ 0.1
CD28-203ENST00000458610 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.67■□□□□ 0.1
CD28-203ENST00000458610 STMND1H3BQB6 276 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms