RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TCEAL1Q15170 157 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 KYNUQ16719 465 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 ASTE1Q2TB18 679 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 GPR33Q49SQ1 333 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 DUS1LQ6P1R4 473 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 FAM198BQ6UWH4 519 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 IGFL3Q6UXB1 125 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 MFSD7Q6UXD7 560 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 MRGPREQ86SM8 312 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 LUZP1Q86V48 1076 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 ZC3H18Q86VM9 953 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 RCOR2Q8IZ40 523 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 SLC34A3Q8N130 599 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 ZNF567Q8N184 647 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 ZADH2Q8N4Q0 377 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 ZBTB2Q8N680 514 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 RBMXL3Q8N7X1 1067 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 Q8NA96 180 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 OR1L3Q8NH93 324 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 DENND1AQ8TEH3 1009 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 NACC2Q96BF6 587 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 TCTN2Q96GX1 697 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 OXNAD1Q96HP4 312 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 RBM41Q96IZ5 413 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 VPS50Q96JG6 964 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 RMDN2Q96LZ7 410 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 QKIQ96PU8 341 aaKnown RBP eCLIP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 FERD3LQ96RJ6 166 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 UCN2Q96RP3 112 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 DNAJC7Q99615 494 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 COPS8Q99627 209 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 CHRNA10Q9GZZ6 450 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 ILKAPQ9H0C8 392 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 GBA3Q9H227 469 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 AGPAT4Q9NRZ5 378 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 IFNKQ9P0W0 207 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 NDOR1Q9UHB4 597 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 PCM1Q15154 2024 aa7.78□□□□□ -1.16
NIF3L1-209ENST00000454952 NUP210LQ5VU65 1888 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 CNTRLQ7Z7A1 2325 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 DIDO1Q9BTC0 2240 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 A1L4Q6 167 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 CCDC66A2RUB6 948 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 ANKUB1A6NFN9 424 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 WIPF3A6NGB9 483 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 AGAP14A8MT82 685 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 QSOX1O00391 747 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 GAPDHSO14556 408 aaPredicted RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 GPR39O43194 453 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 ZNF749O43361 778 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 OR2B3O76000 313 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 CAPN1P07384 714 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 TNNT1P13805 278 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 ATP1B2P14415 290 aaPredicted RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 ST6GAL1P15907 406 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 PECAM1P16284 738 aaPredicted RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 COMTP21964 271 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 OTX2P32243 289 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 SHMT2P34897 504 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 ARCN1P48444 511 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 PER3P56645 1201 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 DCDP81605 110 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 MRPL49Q13405 166 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 NOMO1Q15155 1222 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 EIF2S3LQ2VIR3 472 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 PTCHD3Q3KNS1 767 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 ZNF789Q5FWF6 425 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 CCDC181Q5TID7 509 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 IRAK1BP1Q5VVH5 260 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 KAZNQ674X7 775 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 TLDC1Q6P9B6 456 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 SPOCD1Q6ZMY3 1216 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 B4GALNT4Q76KP1 1039 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 SNX20Q7Z614 316 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 AMIGO1Q86WK6 493 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 CCDC50Q8IVM0 306 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 KATNAL2Q8IYT4 538 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 NXPE1Q8N323 547 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 OR4K2Q8NGD2 314 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 HAUS1Q96CS2 278 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 TRAPPC9Q96Q05 1148 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 FICDQ9BVA6 458 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 AP1M1Q9BXS5 423 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 COG4Q9H9E3 785 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 TXLNGQ9NUQ3 528 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 SAE1Q9UBE0 346 aaPredicted RBP7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 FAM8A1Q9UBU6 413 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 POLG2Q9UHN1 485 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 ARL5AQ9Y689 179 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 CCDC88CQ9P219 2028 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 POLEQ07864 2286 aa7.77□□□□□ -1.17
NIF3L1-209ENST00000454952 FER1L5A0AVI2 2057 aa7.76□□□□□ -1.17
NIF3L1-209ENST00000454952 H7C0C1 242 aa7.76□□□□□ -1.17
NIF3L1-209ENST00000454952 APOC4-APOC2K7ER74 178 aa7.76□□□□□ -1.17
NIF3L1-209ENST00000454952 BTN3A1O00481 513 aa7.76□□□□□ -1.17
NIF3L1-209ENST00000454952 BUD23O43709 281 aaKnown RBP7.76□□□□□ -1.17
NIF3L1-209ENST00000454952 AP2A2O94973 939 aa7.76□□□□□ -1.17
NIF3L1-209ENST00000454952 LCA5LO95447 670 aa7.76□□□□□ -1.17
NIF3L1-209ENST00000454952 CBX6O95503 412 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms