RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 KIFC1Q9BW19 673 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 VPS37BQ9H9H4 285 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 FKBPLQ9UIM3 349 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 CRLS1Q9UJA2 301 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 PLAAQ9Y263 795 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 TCAF1Q9Y4C2 921 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 KCTD3Q9Y597 815 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 ZNF462Q96JM2 2506 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 HEATR9A2RTY3 570 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 B8ZZF3 427 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 SASH3O75995 380 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 STK17BO94768 372 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 USP1O94782 785 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 RALBP11234 206 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 PLA2G2AP14555 144 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 LEPRP48357 1165 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 GPX6P59796 221 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 CRADDP78560 199 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 TMPRSS15P98073 1019 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 FRG1Q14331 258 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 SLC29A2Q14542 456 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 PLCL1Q15111 1095 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 TBR1Q16650 682 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 SPANXN3Q5MJ09 141 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 CACHD1Q5VU97 1274 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 ZNF449Q6P9G9 518 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 UNC5AQ6ZN44 842 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 FAM83HQ6ZRV2 1179 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 BEND7Q8N7W2 519 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 EXD3Q8N9H8 876 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 OR13C4Q8NGS5 318 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 PEX13Q92968 403 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 PKNOX2Q96KN3 472 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 RUFY1Q96T51 708 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 TRIT1Q9H3H1 467 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 GPN2Q9H9Y4 310 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 PPCSQ9HAB8 311 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 IMP3Q9NV31 184 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 FAM8A1Q9UBU6 413 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 COL6A6A6NMZ7 2263 aa17.59■□□□□ 0.41
SQSTM1-204ENST00000453046 POLBP06746 335 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 TPH1P17752 444 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 ADRA1DP25100 572 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 HADHAP40939 763 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 MSLNQ13421 630 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 POU6F1Q14863 301 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 CRYMQ14894 314 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 RPE65Q16518 533 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 UBAP2Q5T6F2 1119 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 KLHL35Q6PF15 583 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 FAM92BQ6ZTR7 304 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 NLRP9Q7RTR0 991 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 CROCCP2Q86T23 111 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 TMEM135Q86UB9 458 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 ZNF669Q96BR6 464 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 ZIM3Q96PE6 472 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 EFHD1Q9BUP0 239 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 SLC12A9Q9BXP2 914 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 ZNF768Q9H5H4 540 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 ACSS3Q9H6R3 686 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 SIDT1Q9NXL6 827 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 RIMKLBQ9ULI2 386 aa17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 HELZ2Q9BYK8 2649 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-204ENST00000453046 ZNF106Q9H2Y7 1883 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 TCRBV9S1A1TA0A576 114 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 KLHL33A6NCF5 533 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 MGAT4DA6NG13 374 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 ZNF891A8MT65 544 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 KIF1CO43896 1103 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 FAM87AP0C7U9 286 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 SFTPCP11686 197 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 ITGALP20701 1170 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 SSTR1P30872 391 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 NFATC3Q12968 1075 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 KLHL38Q2WGJ6 581 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 METRNLQ641Q3 311 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 C3orf62Q6ZUJ4 267 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 CYS1Q717R9 158 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 RASGRP3Q8IV61 690 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 GPR150Q8NGU9 434 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 OR2L2Q8NH16 312 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 NAT14Q8WUY8 206 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 ULK4Q96C45 1275 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 OR6C1Q96RD1 312 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 TMEM109Q9BVC6 243 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 ULBP3Q9BZM4 244 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 SPRY4Q9C004 299 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 WWP1Q9H0M0 922 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 PLAC1Q9HBJ0 212 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 EPHA6Q9UF33 1036 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 FETUBQ9UGM5 382 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 ACSL5Q9ULC5 683 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 TMEM184BQ9Y519 407 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 HEMK1Q9Y5R4 338 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 NFS1Q9Y697 457 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 CFAP20Q9Y6A4 193 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 RPS6KL1Q9Y6S9 549 aa17.57■□□□□ 0.4
SQSTM1-204ENST00000453046 LOC101059948A0A1B0GTJ6 334 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 CFAP99D6REC4 459 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 MTHFD1P11586 935 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms