RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 UBE3AQ05086 875 aa11.52□□□□□ -0.57
VTA1-203ENST00000452973 SYTL3Q4VX76 610 aa11.52□□□□□ -0.57
VTA1-203ENST00000452973 KIAA2013Q8IYS2 634 aa11.52□□□□□ -0.57
VTA1-203ENST00000452973 MINDY1Q8N5J2 469 aa11.52□□□□□ -0.57
VTA1-203ENST00000452973 PHOSPHO2Q8TCD6 241 aa11.52□□□□□ -0.57
VTA1-203ENST00000452973 OSCP1Q8WVF1 389 aa11.52□□□□□ -0.57
VTA1-203ENST00000452973 SLCO4A1Q96BD0 722 aa11.52□□□□□ -0.57
VTA1-203ENST00000452973 IGLV3-16A0A075B6K0 115 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 FAM149AA5PLN7 773 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MAGEA13PA6NCF6 341 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CLDN9O95484 217 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 LYNP07948 512 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CISD3P0C7P0 127 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 PSMD8P48556 350 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MTPNP58546 118 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 EMX2Q04743 252 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 LIPEQ05469 1076 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 PDCD4Q53EL6 469 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 ZDHHC20Q5W0Z9 365 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CAPRIN2Q6IMN6 1127 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 FBXL19Q6PCT2 694 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 RAVER1Q8IY67 606 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 SLC22A15Q8IZD6 547 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 KRTCAP2Q8N6L1 136 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 SELENOMQ8WWX9 145 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ASB11Q8WXH4 323 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MED8Q96G25 268 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CIB1Q99828 191 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 VCXQ9H320 206 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ALG2Q9H553 416 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ACTL8Q9H568 366 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 SLC32A1Q9H598 525 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ZDHHC7Q9NXF8 308 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 RWDD3Q9Y3V2 267 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 A0A1W2PQ67 120 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 FAM234BA2RU67 622 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MT-ND1P03886 318 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CBSLP0DN79 551 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CBSP35520 551 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 HALP42357 657 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 TRAP1Q12931 704 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 MTX3Q5HYI7 312 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 NANOGP8Q6NSW7 305 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ERAP2Q6P179 960 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 LIPIQ6XZB0 460 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 LIX1Q8N485 282 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MCOLN3Q8TDD5 553 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 GATA6Q92908 595 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CCT7Q99832 543 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 KCTD14Q9BQ13 255 aaPredicted RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 SLC2A11Q9BYW1 496 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MTIF3Q9H2K0 278 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 NANOGQ9H9S0 305 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ZIM2Q9NZV7 527 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MARK1Q9P0L2 795 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 EYSQ5T1H1 3165 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MANBAO00462 879 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 PDYNP01213 254 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 EBLN1P0CF75 366 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 GSK3BP49841 420 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 DDX39BQ13838 428 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 TLR1Q15399 786 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 FAM174BQ3ZCQ3 159 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 C6orf52Q5T4I8 152 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 RASGEF1AQ8N9B8 481 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 OR2T34Q8NGX1 318 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 OR2T3Q8NH03 318 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 BPIFB1Q8TDL5 484 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ASZ1Q8WWH4 475 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 FGF13Q92913 245 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 GFM2Q969S9 779 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 TMEM125Q96AQ2 219 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 PPP3R2Q96LZ3 170 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 MYCBPQ99417 103 aaPredicted RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 C19orf43Q9BQ61 176 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 SLC12A9Q9BXP2 914 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 ELOVL6Q9H5J4 265 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 RDH14Q9HBH5 336 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 LRTM1Q9HBL6 345 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
VTA1-203ENST00000452973 EIF3LQ9Y262 564 aaKnown RBP11.51□□□□□ -0.57
VTA1-203ENST00000452973 TBC1D3BA6NDS4 549 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 K7ESM1 405 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 EEDO75530 441 aaKnown RBP11.5□□□□□ -0.57
VTA1-203ENST00000452973 EPORP19235 508 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 CYP2A7P20853 494 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 PBX2P40425 430 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 GNPDA1P46926 289 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 CCSMST1Q4G0I0 132 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 TBCELQ5QJ74 424 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 HENMT1Q5T8I9 393 aaKnown RBP11.5□□□□□ -0.57
VTA1-203ENST00000452973 PRMT9Q6P2P2 845 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 TMEM220Q6QAJ8 160 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 KIAA0907Q7Z7F0 614 aaPredicted RBP11.5□□□□□ -0.57
VTA1-203ENST00000452973 ZFAND4Q86XD8 727 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 TMEM102Q8N9M5 508 aaPredicted RBP11.5□□□□□ -0.57
VTA1-203ENST00000452973 LMNTD1Q8N9Z9 388 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 TMEM159Q96B96 161 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms