RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ABI2Q9NYB9 513 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PI4KBQ9UBF8 816 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SEC14L3Q9UDX4 400 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RIMS3Q9UJD0 308 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PNMA8BQ9ULN7 279 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PCDHB7Q9Y5E2 793 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DLG5Q8TDM6 1919 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MON2Q7Z3U7 1717 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TRPM3Q9HCF6 1732 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 hCG_1818297A0A087WSY0 165 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A0J9YYE9 177 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM234BA2RU67 622 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LINC00862A6NCI5 91 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RRN3P2A6NIE6 340 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SIGLEC16A6NMB1 481 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 M0QYV0 167 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF197O14709 1029 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ARPC2O15144 300 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 KCNJ13O60928 360 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SLC22A3O75751 556 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ATP6AP2O75787 350 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MICAL2O94851 1124 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AP2A2O94973 939 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RPP14O95059 124 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 GABARAPO95166 117 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 APOC3P02656 99 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CD48P09326 243 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 THEGLP0DJG4 465 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 HSD17B1P14061 328 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MAPK3P27361 379 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ECHS1P30084 290 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SSTR1P30872 391 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ARHGDIBP52566 201 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NDST2P52849 883 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TPI1P60174 286 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PSMA6P60900 246 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 EEF1A1P68104 462 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 BLOC1S1P78537 153 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MAT1AQ00266 395 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PFKPQ01813 784 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TAP2Q03519 686 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EEF1A2Q05639 463 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ITKQ08881 620 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CDH17Q12864 832 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ASAH1Q13510 395 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PUM1Q14671 1186 aaKnown RBP eCLIP2.17□□□□□ -2.06
USP53-202ENST00000450251 AANATQ16613 207 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LRIT3Q3SXY7 679 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PLEKHN1Q494U1 663 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 USP39Q53GS9 565 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PAN3Q58A45 887 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 RALGPS1Q5JS13 557 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 C6orf141Q5SZD1 244 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM102AQ5T9C2 384 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ANXA8L1Q5VT79 327 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EEF1A1P5Q5VTE0 462 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AADACL4Q5VUY2 407 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PRAMEF13Q5VWM6 474 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PGBD2Q6P3X8 592 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 KLHL24Q6TFL4 600 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PRSS55Q6UWB4 352 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 CFAP77Q6ZQR2 320 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TPGS1Q6ZTW0 290 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PTCHD4Q6ZW05 846 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MOB2Q70IA6 237 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 APTXQ7Z2E3 356 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF438Q7Z4V0 828 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 R3HCC1LQ7Z5L2 792 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 IRF2BP2Q7Z5L9 587 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 C11orf96Q7Z7L8 435 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PROSER2Q86WR7 435 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 RALGPS2Q86X27 583 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 FOXP4Q8IVH2 680 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 STPG2Q8N412 459 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OR2T12Q8NG77 320 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OR7G2Q8NG99 324 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OR2AP1Q8NGE2 309 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CEP76Q8TAP6 659 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TRIB2Q92519 343 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SMG7Q92540 1137 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 UTP4Q969X6 686 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 COQ10AQ96MF6 247 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OPALINQ96PE5 141 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FERD3LQ96RJ6 166 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NEURL2Q9BR09 285 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MSTO1Q9BUK6 570 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DPCDQ9BVM2 203 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 BTBD2Q9BX70 525 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PIGMQ9H3S5 423 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DHX35Q9H5Z1 703 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 CYP3A43Q9HB55 503 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AKIP1Q9NQ31 210 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SMCO4Q9NRQ5 59 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZIM2Q9NZV7 527 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CCDC167Q9P0B6 97 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SPASTQ9UBP0 616 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TSPOAP1O95153 1857 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TIAM2Q8IVF5 1701 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A0A0MRY4 1105 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms