RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 VPS4BO75351 444 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SEC22BO75396 215 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 UROSP10746 265 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 NAT1P18440 290 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 GRK3P35626 688 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 GABARAPL2P60520 117 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 GALNT1Q10472 559 aaPredicted RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 CEP78Q5JTW2 689 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 ZNF648Q5T619 568 aaPredicted RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 OR52E6Q96RD3 313 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SP140LQ9H930 580 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 AGO3Q9H9G7 860 aaKnown RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 CATSPERZQ9NTU4 200 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 TAS2R13Q9NYV9 303 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 IKZF3Q9UKT9 509 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 RNF6Q9Y252 685 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 GOLGA4Q13439 2230 aaKnown RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 MGAMO43451 1857 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 CSRP3P50461 194 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 SEMA3AQ14563 771 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 MED22Q15528 200 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 CCDC85BQ15834 202 aaPredicted RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 NOTUMQ6P988 496 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 ANGPTL8Q6UXH0 198 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 NRARPQ7Z6K4 114 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 CIR1Q86X95 450 aaPredicted RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 GPSM1Q86YR5 675 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 ELMOD2Q8IZ81 293 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 STX19Q8N4C7 294 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SIDT2Q8NBJ9 832 aaKnown RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 PHF10Q8WUB8 498 aaKnown RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 NTAN1Q96AB6 310 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 KCNC2Q96PR1 638 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 ZNF300Q96RE9 604 aaPredicted RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
CHFR-205ENST00000450056 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 NIPSNAP2O75323 286 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 CREG1O75629 220 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 B3GALT4O96024 378 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 FGF4P08620 206 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SLC26A3P40879 764 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 FCGRTP55899 365 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 PLEKHG6Q3KR16 790 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SIRPB2Q5JXA9 342 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 LAIR1Q6GTX8 287 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 CEP68Q76N32 757 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 FAM217AQ8IXS0 508 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SLC13A3Q8WWT9 602 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SEMA3CQ99985 751 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 MMP28Q9H239 520 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 TIGARQ9NQ88 270 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SMPD4Q9NXE4 827 aa13.79□□□□□ -0.2
CHFR-205ENST00000450056 SAGE2PA6NJ88 616 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 PRKCAP17252 672 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 DNAJB1P25685 340 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 ZRANB3Q5FWF4 1079 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 ZNF484Q5JVG2 852 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 WDR45BQ5MNZ6 344 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 AGAP6Q5VW22 663 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 ZNF544Q6NX49 715 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 ZFAND4Q86XD8 727 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 SVOPLQ8N434 492 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 PSMG2Q969U7 264 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 SENP8Q96LD8 212 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 AGAP4Q96P64 663 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
CHFR-205ENST00000450056 SLC2A13Q96QE2 648 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 SLC9A7Q96T83 725 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 VNN3Q9NY84 501 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 ZNF639Q9UID6 485 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 PCDHGB6Q9Y5F9 930 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 FAM172BPA6NC97 362 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 PER2O15055 1255 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 MGEA5O60502 916 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 SH3BGRLO75368 114 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 COL6A1P12109 1028 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 GDF5P43026 501 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 CTSKP43235 329 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 SLC15A1P46059 708 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 CDKN1CP49918 316 aaPredicted RBP13.78□□□□□ -0.2
CHFR-205ENST00000450056 MXD1Q05195 221 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 SEMA3BQ13214 749 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 PWP1Q13610 501 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 ACOX1Q15067 660 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 GRIK4Q16099 956 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 PRSS36Q5K4E3 855 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 KIAA0319Q5VV43 1072 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 RGMBQ6NW40 437 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 LYPD8Q6UX82 237 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 DLEU7Q6UYE1 221 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 NLGN2Q8NFZ4 835 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 OR52J3Q8NH60 311 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 LINGO1Q96FE5 620 aa13.78□□□□□ -0.2
CHFR-205ENST00000450056 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms