RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TICAM1Q8IUC6 712 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 PHC3Q8NDX5 983 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 OR8K1Q8NGG5 319 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.59■■□□□ 1.37
PMS1-214ENST00000446877 RANBP9Q96S59 729 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 ZNF552Q9H707 407 aaPredicted RBP23.59■■□□□ 1.37
PMS1-214ENST00000446877 VPS37BQ9H9H4 285 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 P4HTMQ9NXG6 502 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 ACTR10Q9NZ32 417 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 IFT80Q9P2H3 777 aaPredicted RBP23.59■■□□□ 1.37
PMS1-214ENST00000446877 HYOU1Q9Y4L1 999 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 SPTBP11277 2137 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 ABCA12Q86UK0 2595 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 CRTAMO95727 393 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 PRKG2Q13237 762 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 TAZQ16635 292 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 SPOCD1Q6ZMY3 1216 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 PTERQ96BW5 349 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 XKR8Q9H6D3 395 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 COG4Q9H9E3 785 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 ATP13A2Q9NQ11 1180 aa23.58■■□□□ 1.37
PMS1-214ENST00000446877 SEC16AO15027 2179 aa23.58■■□□□ 1.36
PMS1-214ENST00000446877 HACD1B0YJ81 288 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 TPM3P06753 285 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 ITGALP20701 1170 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 COMTP21964 271 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 CYP2A13Q16696 494 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 SPESP1Q6UW49 350 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 SLC34A3Q8N130 599 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 NXPE1Q8N323 547 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 OR2Y1Q8NGV0 311 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 PROKR1Q8TCW9 393 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 UBE2Q2Q8WVN8 375 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 HAUS1Q96CS2 278 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 QKIQ96PU8 341 aaKnown RBP eCLIP23.57■■□□□ 1.36
PMS1-214ENST00000446877 AP1M1Q9BXS5 423 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 OR52A5Q9H2C5 316 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 FAM96AQ9H5X1 160 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 TXLNGQ9NUQ3 528 aa23.57■■□□□ 1.36
PMS1-214ENST00000446877 AGAP14A8MT82 685 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 TNFRSF8P28908 595 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 XIAPP98170 497 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 TFDP3Q5H9I0 405 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 ITPRIPL1Q6GPH6 555 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 RHBDD2Q6NTF9 364 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 Q6ZS92 163 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 SNX20Q7Z614 316 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 ADGRF3Q8IZF5 1079 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 C19orf47Q8N9M1 422 aaKnown RBP23.56■■□□□ 1.36
PMS1-214ENST00000446877 TFGQ92734 400 aaPredicted RBP23.56■■□□□ 1.36
PMS1-214ENST00000446877 CCDC42Q96M95 316 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 NRTNQ99748 197 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 FERMT1Q9BQL6 677 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 HGH1Q9BTY7 390 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 SPRTNQ9H040 489 aaPredicted RBP23.56■■□□□ 1.36
PMS1-214ENST00000446877 IRAK4Q9NWZ3 460 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 PCDHGA10Q9Y5H3 936 aa23.56■■□□□ 1.36
PMS1-214ENST00000446877 TEP1Q99973 2627 aaKnown RBP23.55■■□□□ 1.36
PMS1-214ENST00000446877 SOX8P57073 446 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 TMPRSS15P98073 1019 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 RPA4Q13156 261 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 CRB2Q5IJ48 1285 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 C1QL3Q5VWW1 255 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 RANBP10Q6VN20 620 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 SRRM1Q8IYB3 904 aaKnown RBP23.55■■□□□ 1.36
PMS1-214ENST00000446877 GBP5Q96PP8 586 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 BARD1Q99728 777 aaKnown RBP23.55■■□□□ 1.36
PMS1-214ENST00000446877 APOL2Q9BQE5 337 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 GBA3Q9H227 469 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 FAM60AQ9NP50 221 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 SRPK3Q9UPE1 567 aa23.55■■□□□ 1.36
PMS1-214ENST00000446877 AAR2Q9Y312 384 aaKnown RBP23.55■■□□□ 1.36
PMS1-214ENST00000446877 PSTPIP1O43586 416 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 ZRANB2O95218 330 aaKnown RBP eCLIP23.54■■□□□ 1.365e-9■□□□□ 10.7
PMS1-214ENST00000446877 PDHA2P29803 388 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 PER3P56645 1201 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 BOP1Q14137 746 aaKnown RBP23.54■■□□□ 1.36
PMS1-214ENST00000446877 PRPSAP1Q14558 356 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 SLC9A5Q14940 896 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 GPR33Q49SQ1 333 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 CUZD1Q86UP6 607 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 TRIM73Q86UV7 250 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 CCDC50Q8IVM0 306 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 ST6GALNAC3Q8NDV1 305 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 OR13C4Q8NGS5 318 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 INPP5DQ92835 1189 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 DNAJC7Q99615 494 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 SPTLC3Q9NUV7 552 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 ZDHHC3Q9NYG2 299 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 CDYLQ9Y232 598 aa23.54■■□□□ 1.36
PMS1-214ENST00000446877 H7C0C1 242 aa23.53■■□□□ 1.36
PMS1-214ENST00000446877 ZSCAN9O15535 394 aaPredicted RBP23.53■■□□□ 1.36
PMS1-214ENST00000446877 ATP5OP48047 213 aa23.53■■□□□ 1.36
PMS1-214ENST00000446877 DEFB110Q30KQ9 67 aa23.53■■□□□ 1.36
PMS1-214ENST00000446877 NKAIN1Q4KMZ8 207 aa23.53■■□□□ 1.36
PMS1-214ENST00000446877 PPP1R32Q7Z5V6 425 aa23.53■■□□□ 1.36
PMS1-214ENST00000446877 RCOR2Q8IZ40 523 aa23.53■■□□□ 1.36
PMS1-214ENST00000446877 ZNF655Q8N720 491 aaPredicted RBP23.53■■□□□ 1.36
PMS1-214ENST00000446877 NDC1Q9BTX1 674 aa23.53■■□□□ 1.36
PMS1-214ENST00000446877 ZBTB20Q9HC78 741 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms