RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 CCDC110Q8TBZ0 833 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 RBM41Q96IZ5 413 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 COPS8Q99627 209 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 SMAD5Q99717 465 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 SPRTNQ9H040 489 aaPredicted RBP13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 PCDHGB7Q9Y5F8 929 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 PCDHA3Q9Y5H8 950 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 HEBP2Q9Y5Z4 205 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 SEC16AO15027 2179 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 ESPL1Q14674 2120 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 A1L4Q6 167 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 DPM1O60762 260 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 CRTAMO95727 393 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 PYGMP11217 842 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 MC4RP32245 332 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 BOP1Q14137 746 aaKnown RBP13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 PLEKHN1Q494U1 663 aaPredicted RBP13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 ITPRIPL1Q6GPH6 555 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 MED25Q71SY5 747 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 SERPINA9Q86WD7 417 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 AMIGO1Q86WK6 493 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 PIANPQ8IYJ0 282 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 TMEM102Q8N9M5 508 aaPredicted RBP13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 FLVCR1-AS1Q8TAF5 88 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 MRFAP1L1Q96HT8 127 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 DNAJC1Q96KC8 554 aaKnown RBP13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 PANX2Q96RD6 677 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 FANCEQ9HB96 536 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 ARNT2Q9HBZ2 717 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 CASS4Q9NQ75 786 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 ZDHHC3Q9NYG2 299 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 SERTAD3Q9UJW9 196 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 ICKQ9UPZ9 632 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 PRSS21Q9Y6M0 314 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 NOTCH2Q04721 2471 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 UNC79Q9P2D8 2635 aa13.72□□□□□ -0.21
SMARCAL1-210ENST00000445153 FER1L5A0AVI2 2057 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 E7EQ34 232 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 MATN2O00339 956 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 KCNN4O15554 427 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 CNOT3O75175 753 aaKnown RBP13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 RBP3P10745 1247 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 RALBP11234 206 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 TPH1P17752 444 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 ITGALP20701 1170 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 COL8A1P27658 744 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 CD151P48509 253 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 KLHDC8BQ8IXV7 354 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 TFGQ92734 400 aaPredicted RBP13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 PNPLA2Q96AD5 504 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 ULK4Q96C45 1275 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 SNRNP40Q96DI7 357 aaKnown RBP13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 TCTN2Q96GX1 697 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 TBL1YQ9BQ87 522 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 HGH1Q9BTY7 390 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 OSBPL8Q9BZF1 889 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 SLAMF7Q9NQ25 335 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 SPHK1Q9NYA1 384 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 GPR83Q9NYM4 423 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 ACTR10Q9NZ32 417 aa13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 PACSIN2Q9UNF0 486 aaPredicted RBP13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 AAR2Q9Y312 384 aaKnown RBP13.71□□□□□ -0.21
SMARCAL1-210ENST00000445153 CCDC88CQ9P219 2028 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 TCRBV7S2A1N4TA0A589 114 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 C2orf74A8MZ97 194 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 CTNNA2P26232 953 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 ACRV1P26436 265 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 OTX2P32243 289 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 PTPN7P35236 360 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 CYLC1P35663 651 aaPredicted RBP13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 EIF3EP60228 445 aaKnown RBP13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 SPA17Q15506 151 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 DEFB110Q30KQ9 67 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 GPR33Q49SQ1 333 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 ZRANB3Q5FWF4 1079 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 C1orf189Q5VU69 101 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 MLIPQ5VWP3 458 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 KCTD11Q693B1 232 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 DARS2Q6PI48 645 aaKnown RBP13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 SPESP1Q6UW49 350 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 NAPRTQ6XQN6 538 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 UNC5AQ6ZN44 842 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 OR5AR1Q8NGP9 310 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 SPATA13Q96N96 652 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 OR2A14Q96R47 310 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 RANBP9Q96S59 729 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 C19orf43Q9BQ61 176 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 MVB12BQ9H7P6 319 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 ZBTB20Q9HC78 741 aaPredicted RBP13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 ASF1BQ9NVP2 202 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 R3HDM2Q9Y2K5 976 aaKnown RBP13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 PIKFYVEQ9Y2I7 2098 aa13.7□□□□□ -0.22
SMARCAL1-210ENST00000445153 HIVEP3Q5T1R4 2406 aa13.69□□□□□ -0.22
SMARCAL1-210ENST00000445153 MACROD2A1Z1Q3 448 aa13.69□□□□□ -0.22
SMARCAL1-210ENST00000445153 WIPF3A6NGB9 483 aa13.69□□□□□ -0.22
SMARCAL1-210ENST00000445153 CFAP99D6REC4 459 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms