RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 C12orf65Q9H3J6 166 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 A0A0J9YVX5 310 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 KRT75O95678 551 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 UROSP10746 265 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 BPIP17213 487 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 GTF2E2P29084 291 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 PLA2G16P53816 162 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 MANFP55145 182 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 HSF5Q4G112 596 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 TWIST2Q8WVJ9 160 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 NELL1Q92832 810 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 TSACCQ96A04 125 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ZSWIM3Q96MP5 696 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 PLEKHG4BQ96PX9 1271 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 TMEM237Q96Q45 408 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 CCT7Q99832 543 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 DLGAP2Q9P1A6 1054 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 SNX7Q9UNH6 387 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 OR1A2Q9Y585 309 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 TRIM24O15164 1050 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ANXA4P09525 319 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 TBL3Q12788 808 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 SIM2Q14190 667 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF648Q5T619 568 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 C9orf64Q5T6V5 341 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 PRPF38BQ5VTL8 546 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 PARS2Q7L3T8 475 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 C16orf62Q7Z3J2 963 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 RASGRP3Q8IV61 690 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 TMCO5AQ8N6Q1 288 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 PANX1Q96RD7 426 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF232Q9UNY5 417 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 PSMD11O00231 422 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 MAN1A2O60476 641 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 SNRPB2P08579 225 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ENO2P09104 434 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ACRV1P26436 265 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 CD6P30203 668 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 RRM2P31350 389 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ARF5P84085 180 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 CPTPQ5TA50 214 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 RANBP10Q6VN20 620 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 C19orf60Q96EN9 201 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 HSPA12BQ96MM6 686 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 TBCDQ9BTW9 1192 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 H2AFY2Q9P0M6 372 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 C9J4A7 227 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 KERAO60938 352 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SHMT2P34897 504 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 INTS11Q5TA45 600 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 OR9A1PQ8NGU1 263 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 CHFRQ96EP1 664 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SSU72Q9NP77 194 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 TBC1D23Q9NUY8 699 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 FBXW2Q9UKT8 454 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 UBOX5O94941 541 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 IL4RP24394 825 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 GPX6P59796 221 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 C2orf80Q0P641 193 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SLBPQ14493 270 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SLC5A9Q2M3M2 681 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SCUBE1Q8IWY4 988 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 HBEGFQ99075 208 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF446Q9NWS9 450 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 HS3ST2Q9Y278 367 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 OR1I1O60431 355 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 UQCRBP14927 111 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 EIF2DP41214 584 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 CSNK1DP48730 415 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 INPP1P49441 399 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 IRF9Q00978 393 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 CYP4F3Q08477 520 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 AGTRAPQ6RW13 159 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF276Q8N554 614 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF555Q8NEP9 628 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 CLHC1Q8NHS4 586 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 NT5C3BQ969T7 300 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 HERPUD2Q9BSE4 406 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SLC32A1Q9H598 525 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SEMA3GQ9NS98 782 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 HRASLS2Q9NWW9 162 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 ADPRHL2Q9NX46 363 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 NPIPB15A6NHN6 443 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 FOXO6A8MYZ6 492 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 CDC7O00311 574 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 ATP6V1G2O95670 118 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 AGXTP21549 392 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 CD68P34810 354 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 SP140Q13342 867 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 CAMKVQ8NCB2 501 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 OR52E6Q96RD3 313 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 MCMBPQ9BTE3 642 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 BRINP2Q9C0B6 783 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 DCLRE1BQ9H816 532 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 VPS4AQ9UN37 437 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 PCDHB11Q9Y5F2 797 aa13.81□□□□□ -0.2
SMARCA4-204ENST00000444061 HOXC11O43248 304 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 B3GALT2O43825 422 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SRFP11831 508 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms