RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ATPAF1Q5TC12 328 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 GKAP1Q5VSY0 366 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 TXNRD3NBQ6F5E7 133 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 OR6B2Q6IFH4 312 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 LCLAT1Q6UWP7 414 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CENPUQ71F23 418 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 GPR142Q7Z601 462 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 EXOC3L1Q86VI1 746 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 RFX6Q8HWS3 928 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZDHHC17Q8IUH5 632 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 C10orf67Q8IYJ2 551 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SAMD14Q8IZD0 417 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 OR8H2Q8N162 312 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZCCHC9Q8N567 271 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 EMC1Q8N766 993 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NRACQ8N912 160 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 KCTD6Q8NC69 237 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 BEST2Q8NFU1 509 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CMASQ8NFW8 434 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 OR6J1Q8NGC5 347 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 JOSD2Q8TAC2 188 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 UBA3Q8TBC4 463 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 UCMAQ8WVF2 138 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARHGEF2Q92974 986 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZUFSPQ96AP4 578 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MCRS1Q96EZ8 462 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CHMP6Q96FZ7 201 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 WDYHV1Q96HA8 205 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZFYVE19Q96K21 471 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CFAP57Q96MR6 1250 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 TTC25Q96NG3 672 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 TSPAN18Q96SJ8 248 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CPXM1Q96SM3 734 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 PARK7Q99497 189 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NCAPGQ9BPX3 1015 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CNPY3Q9BT09 278 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAK16Q9BXY0 300 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 GCOM2Q9BZD3 368 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNAI2Q9GZS0 605 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 PAIP1Q9H074 479 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NUAK2Q9H093 628 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ABHD16BQ9H3Z7 469 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SMYD3Q9H7B4 428 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZWILCHQ9H900 591 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 KCNK9Q9NPC2 374 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 INTS9Q9NV88 658 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SETD4Q9NVD3 440 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NINJ2Q9NZG7 142 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 LGALS13Q9UHV8 139 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CYTH4Q9UIA0 394 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNPEPQ9ULA0 475 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 FZD4Q9ULV1 537 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NAALADL1Q9UQQ1 740 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SQORQ9Y6N5 450 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 FNDC1Q4ZHG4 1894 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NRCAMQ92823 1304 aa3.46□□□□□ -1.85
HMGB3P11-201ENST00000440127 PAPPA2Q9BXP8 1791 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 MYH10P35580 1976 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 LY6G6EA0A0G2JKS1 128 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 GOLGA6L7A0A1B0GV03 622 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM90A8PA6NJQ4 464 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ANKRD65E5RJM6 399 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 F8W810 466 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 APOC4-APOC2K7ER74 178 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SGK1O00141 431 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ALOX15BO15296 676 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRPSAP2O60256 369 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CST8O60676 142 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMCC2O75069 709 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CBFA2T3O75081 653 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CDH16O75309 829 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 RPP40O75818 363 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMEM63AO94886 807 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 WDR47O94967 919 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 RTN3O95197 1032 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 IFNB1P01574 187 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 APOC2P02655 101 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 VIMP08670 466 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CSF1P09603 554 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM90A13PP0C7W8 464 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM90A24PP0C7X0 464 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SRGAP2BP0DMP2 458 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SMIM10L2AP0DMW4 78 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SMIM10L2BP0DMW5 78 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRF1P14222 555 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 DARSP14868 501 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ETS1P14921 441 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PDGFRAP16234 1089 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 DESP17661 470 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 MIPP30301 263 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 AXLP30530 894 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 HOXA11P31270 313 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 AKT1P31749 480 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 STIP1P31948 543 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PHBP35232 272 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 RPL22P35268 128 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PCK1P35558 622 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 RAD52P43351 418 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms