RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TBC1D21Q8IYX1 336 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 SLC22A15Q8IZD6 547 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 NLGN4XQ8N0W4 816 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 NLGN4YQ8NFZ3 816 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-217ENST00000439669 PPM1MQ96MI6 270 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 ULBP3Q9BZM4 244 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 SOHLH2Q9NX45 425 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 PILRAQ9UKJ1 303 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 LAMA5O15230 3695 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 BTN3A3O00478 584 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 ZBTB11O95625 1053 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-217ENST00000439669 EBLN1P0CF75 366 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 FOLR1P15328 257 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 AOAHP28039 575 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 FMO4P31512 558 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 PTGIRP43119 386 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 HSD11B2P80365 405 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 THOC5Q13769 683 aaKnown RBP23.32■■□□□ 1.32
CPNE1-217ENST00000439669 DNAJC21Q5F1R6 531 aaKnown RBP23.32■■□□□ 1.32
CPNE1-217ENST00000439669 IZUMO3Q5VZ72 239 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 NEPROQ6NW34 567 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 FBXO38Q6PIJ6 1188 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 OR5K2Q8NHB8 316 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 GSDMBQ8TAX9 411 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 SNRNP27Q8WVK2 155 aaKnown RBP23.32■■□□□ 1.32
CPNE1-217ENST00000439669 LPGAT1Q92604 370 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 RUNDC3BQ96NL0 473 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 TCF12Q99081 682 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 PDE7BQ9NP56 450 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 POLG2Q9UHN1 485 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 ICKQ9UPZ9 632 aa23.32■■□□□ 1.32
CPNE1-217ENST00000439669 TMEM184BQ9Y519 407 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-217ENST00000439669 GPC4O75487 556 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 SHMT2P34897 504 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 DR1Q01658 176 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 ACY1Q03154 408 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 CTSL3PQ5NE16 218 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 ZNF470Q6ECI4 717 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 PCGF5Q86SE9 256 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 PPP1R3BQ86XI6 285 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 CARFQ8N187 725 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 AGGF1Q8N302 714 aaeCLIP23.31■■□□□ 1.32
CPNE1-217ENST00000439669 C17orf53Q8N3J3 647 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-217ENST00000439669 ZSCAN1Q8NBB4 408 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 CFAP61Q8NHU2 1237 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 STAMBPL1Q96FJ0 436 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 SPRY4Q9C004 299 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 RARRES3Q9UL19 164 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 PLAGL1Q9UM63 463 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 CDYLQ9Y232 598 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 CRYL1Q9Y2S2 319 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 ZFHX4Q86UP3 3567 aa23.31■■□□□ 1.32
CPNE1-217ENST00000439669 C2orf74A8MZ97 194 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 KPNA5O15131 536 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 KDM1AO60341 852 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 USP1O94782 785 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 DLGAP3O95886 979 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 FGF5P12034 268 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 ZNF28P17035 718 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 MAP4P27816 1152 aaKnown RBP23.3■■□□□ 1.32
CPNE1-217ENST00000439669 RHDQ02161 417 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 ABRQ12979 859 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 TMTC4Q5T4D3 741 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 KIAA1614Q5VZ46 1190 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 SYDE1Q6ZW31 735 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-217ENST00000439669 OTOAQ7RTW8 1153 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 TIPARPQ7Z3E1 657 aaKnown RBP23.3■■□□□ 1.32
CPNE1-217ENST00000439669 TMEM135Q86UB9 458 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 CILP2Q8IUL8 1156 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 SKA2Q8WVK7 121 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-217ENST00000439669 C1GALT1Q9NS00 363 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 FGF21Q9NSA1 209 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 ACTR10Q9NZ32 417 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 LNPEPQ9UIQ6 1025 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 PCDHGA4Q9Y5G9 962 aa23.3■■□□□ 1.32
CPNE1-217ENST00000439669 ZCWPW2A0A1B0GU75 182 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 SLC9B1P1A6NJY1 282 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 H3BMM5 538 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 CCDC188H7C350 402 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 FANCGO15287 622 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 NIPSNAP2O75323 286 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 KIAA0754O94854 1291 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 SLCO2B1O94956 709 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 ESR1P03372 595 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 RPN2P04844 631 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 LIFP15018 202 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 WT1P19544 449 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-217ENST00000439669 PRDX3P30048 256 aaKnown RBP23.29■■□□□ 1.32
CPNE1-217ENST00000439669 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.29■■□□□ 1.32
CPNE1-217ENST00000439669 SOWAHCQ53LP3 525 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-217ENST00000439669 UNC5AQ6ZN44 842 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 HOOK3Q86VS8 718 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 ADGRF3Q8IZF5 1079 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 D2HGDHQ8N465 521 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 KIAA1143Q96AT1 154 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-217ENST00000439669 SIGLEC10Q96LC7 697 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 BIRC8Q96P09 236 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 BBC3Q96PG8 261 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-217ENST00000439669 C20orf96Q9NUD7 363 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-217ENST00000439669 RNF14Q9UBS8 474 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms